Kwal_16621 (Kluyveromyces waltii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Kwal_16621 T146348_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TDA9
M00035_2.00 		Saccharomyces cerevisiae
NNCCCCGCAH
DTGCGGGGNN		 PBM
Badis et al.(2008)
YML081W_2152 		0.807 0.913
TDA9
M01537_2.00 		Saccharomyces cerevisiae
NNCCCCDCHN
NDGHGGGGNN		 PBM
Zhu et al.(2009)
Yml081w 		0.807 0.913
TDA9
M07465_2.00 		Saccharomyces cerevisiae
NCCCCDCHN
NDGHGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0431.1 		0.807 0.913
TDA9
M08537_2.00 		Saccharomyces cerevisiae
NHDNRHTACCCCGCWNHNNNB
VNNNDNWGCGGGGTADYNHDN		 Misc
DeBoer et al.(2011)
YML081W_848 		0.807 0.913
RSF2
M00031_2.00 		Saccharomyces cerevisiae
NDCCCCKCWN
NWGMGGGGHN		 PBM
Badis et al.(2008)
ZMS1_4493 		0.791 0.848
RSF2
M07461_2.00 		Saccharomyces cerevisiae
NWCCCCDCW
WGHGGGGWN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0441.1 		0.791 0.848
RSF2
M08532_2.00 		Saccharomyces cerevisiae
NWCCCCDCW
WGHGGGGWN		 Misc
DeBoer et al.(2011)
YJR127C_575 		0.791 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Kwal_16621 C2H2 ZF 78 100
Kwal_16621 C2H2 ZF 106 129

Links

Other C2H2 ZF family TFs
Other Kluyveromyces waltii TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000097 Oryza indica BGIOSGA000097 N 0.000
BGIOSGA005178 Oryza indica BGIOSGA005178 N 0.000
BRADI3G43250 Brachypodium distachyon BRADI3G43250 N 0.000
F775_19529 Aegilops tauschii F775_19529 N 0.000
F775_31854 Aegilops tauschii F775_31854 N 0.000
GRMZM2G057413 Zea mays GRMZM2G057413 N 0.000
LPERR01G38470 Leersia perrieri LPERR01G38470 N 0.000
MLOC_36351 Hordeum vulgare MLOC_36351 N 0.000
MLOC_72280 Hordeum vulgare MLOC_72280 N 0.000
OB01G53300 Oryza brachyantha OB01G53300 N 0.000
OBART01G44150 Oryza barthii OBART01G44150 N 0.000
OGLUM01G48440 Oryza glumaepatula OGLUM01G48440 N 0.000
OLONG_006457 Oryza longistaminata OLONG_006457 N 0.000
OMERI01G40940 Oryza meridionalis OMERI01G40940 N 0.000
ONIVA01G50120 Oryza nivara ONIVA01G50120 N 0.000
OPUNC01G43070 Oryza punctata OPUNC01G43070 N 0.000
ORGLA01G0380200 Oryza glaberrima ORGLA01G0380200 N 0.000
ORUFI01G47560 Oryza rufipogon ORUFI01G47560 N 0.000
OS01G0952800 Oryza sativa OS01G0952800 N 0.000
Pavir.Ea04053 Panicum virgatum Pavir.Ea04053 N 0.000
Pavir.J04771 Panicum virgatum Pavir.J04771 N 0.000
Sb03g046090 Sorghum bicolor Sb03g046090 N 0.000
Si002720m.g Setaria italica Si002720m.g N 0.000
TRAES3BF136000020CFD_g Triticum aestivum TRAES3BF136000020CFD_g N 0.000
Traes_2AL_ACBAA6A31 Triticum aestivum Traes_2AL_ACBAA6A31 N 0.000
Traes_2BL_00608F8D6 Triticum aestivum Traes_2BL_00608F8D6 N 0.000
Traes_2DL_865346DA2 Triticum aestivum Traes_2DL_865346DA2 N 0.000
Traes_3AL_95403ABBA Triticum aestivum Traes_3AL_95403ABBA N 0.000
TRIUR3_18175 Triticum urartu TRIUR3_18175 N 0.000
TRIUR3_22165 Triticum urartu TRIUR3_22165 N 0.000