Pavir.Ea04053 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ea04053 T050750_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea04053.1.p bHLH 74 126
Pavir.Ea04053.2.p bHLH 74 126

Links

Other bHLH family TFs
Other Panicum virgatum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000097 Oryza indica BGIOSGA000097 N 0.914
BGIOSGA005178 Oryza indica BGIOSGA005178 N 0.914
BRADI3G43250 Brachypodium distachyon BRADI3G43250 N 0.914
F775_19529 Aegilops tauschii F775_19529 N 0.914
LPERR01G38470 Leersia perrieri LPERR01G38470 N 0.914
MLOC_72280 Hordeum vulgare MLOC_72280 N 0.914
OB01G53300 Oryza brachyantha OB01G53300 N 0.914
OBART01G44150 Oryza barthii OBART01G44150 N 0.914
OGLUM01G48440 Oryza glumaepatula OGLUM01G48440 N 0.914
OLONG_006457 Oryza longistaminata OLONG_006457 N 0.914
OMERI01G40940 Oryza meridionalis OMERI01G40940 N 0.914
ONIVA01G50120 Oryza nivara ONIVA01G50120 N 0.914
OPUNC01G43070 Oryza punctata OPUNC01G43070 N 0.914
ORGLA01G0380200 Oryza glaberrima ORGLA01G0380200 N 0.914
ORUFI01G47560 Oryza rufipogon ORUFI01G47560 N 0.914
OS01G0952800 Oryza sativa OS01G0952800 N 0.914
Sb03g046090 Sorghum bicolor Sb03g046090 N 0.914
Si002720m.g Setaria italica Si002720m.g N 0.914
Traes_2BL_00608F8D6 Triticum aestivum Traes_2BL_00608F8D6 N 0.914
Traes_2DL_865346DA2 Triticum aestivum Traes_2DL_865346DA2 N 0.914
TRIUR3_22165 Triticum urartu TRIUR3_22165 N 0.914
Pavir.J04771 Panicum virgatum Pavir.J04771 N 0.914
GRMZM2G057413 Zea mays GRMZM2G057413 N 0.894
BRADI2G60970 Brachypodium distachyon BRADI2G60970 N 0.888
BRADI2G61050 Brachypodium distachyon BRADI2G61050 N 0.888
MLOC_36351 Hordeum vulgare MLOC_36351 N 0.888
Traes_2AL_ACBAA6A31 Triticum aestivum Traes_2AL_ACBAA6A31 N 0.886
TRIUR3_18175 Triticum urartu TRIUR3_18175 N 0.886
AC193786.3_FG005 Zea mays AC193786.3_FG005 N 0.861
F775_31854 Aegilops tauschii F775_31854 N 0.859
MLOC_67053 Hordeum vulgare MLOC_67053 N 0.859
Traes_3AL_95403ABBA Triticum aestivum Traes_3AL_95403ABBA N 0.859
TRAES3BF136000020CFD_g Triticum aestivum TRAES3BF136000020CFD_g N 0.859