SAKL0B11330g (Lachancea kluyveri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SAKL0B11330g T146626_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.805 0.848
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.781 0.848
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.781 0.848
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.781 0.848
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.757 0.804
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.761
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.757 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.757 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.757 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0B11330g C2H2 ZF 442 465
SAKL0B11330g C2H2 ZF 471 493

Links

Other C2H2 ZF family TFs
Other Lachancea kluyveri TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI26006 Xenopus laevis AAI26006 I 0.000
Aan_R001655 Calypte anna Aan_R001655 I 0.000
AAO72733 Xenopus laevis AAO72733 I 0.000
ABF71072 Xenopus laevis ABF71072 I 0.000
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.000
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.000
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.000
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.000
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.000
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.000
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.000
epas1b Danio rerio ENSDARG00000057671 N 0.000
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.000
HIF1A Homo sapiens ENSG00000100644 D 0.000
HIF1A Gallus gallus ENSGALG00000011870 I 0.000
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.000
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.000
Hif1a Mus musculus ENSMUSG00000021109 D 0.000
ENSONIG00000020112 Oreochromis niloticus ENSONIG00000020112 N 0.000
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.000
ENSPMAG00000000126 Petromyzon marinus ENSPMAG00000000126 N 0.000
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.000
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.000
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.000
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.000
Gfo_R006824 Geospiza fortis Gfo_R006824 I 0.000
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.000
Tal_R011146 Tyto alba Tal_R011146 I 0.000
hif1a Xenopus tropicalis XB-GENE-946622 I 0.000