genemark-nMf.1.1.scaf15253-processed-gene-0.1 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 genemark-nMf.1.1.scaf15253-processed-gene-0.1 T153539_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 98 118
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 126 148
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 153 174
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 180 202

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_100265 Phytophthora capsici estExt_fgenesh1_kg.C_100265 N
F443_09654 Phytophthora parasitica F443_09654 N
F443_09657 Phytophthora parasitica F443_09657 N
fgenesh_scip_prom.28083.7565 Phytophthora lateralis fgenesh_scip_prom.28083.7565 N
maker-piw_contig_219-fgenesh-gene-0.6 Pythium iwayamai maker-piw_contig_219-fgenesh-gene-0.6 N
maker-pve_contig_400-snap-gene-0.15 Pythium vexans maker-pve_contig_400-snap-gene-0.15 N
Phyra85116 Phytophthora ramorum Phyra85116 N
Phyra85118 Phytophthora ramorum Phyra85118 N
Physo134441 Phytophthora sojae Physo134441 N
PITG_13196 Phytophthora infestans PITG_13196 N
PYU1_G013491 Pythium ultimum PYU1_G013491 N