CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI02104000
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI02104000
T153877_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02104000.t1
C2H2 ZF
178
200
QCPFCDKRFRNEVSLKKHFVKKH
HCOI02104000.t1
C2H2 ZF
207
228
VQCLDCFKCLPDKSHLAEHECD
HCOI02104000.t1
C2H2 ZF
263
286
FKCNECNQKFLTPRKLRKHKKMSH
HCOI02104000.t1
C2H2 ZF
292
314
YACHFCEELFTSEVSVMTHERIH
HCOI02104000.t1
C2H2 ZF
320
343
FECKICDFRCNRYIQMENHKKEDH
HCOI02104000.t1
C2H2 ZF
345
368
YLCSICQESFGEWAEIKNHTLSKH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000942901
Angiostrongylus cantonensis
ACAC_0000942901
N
0.789
ACOC_0000498301
Angiostrongylus costaricensis
ACOC_0000498301
N
0.786
ANCCAN_26646
Ancylostoma caninum
ANCCAN_26646
N
0.805
ANCCEY_03506
Ancylostoma ceylanicum
ANCCEY_03506
N
0.811
ANCDUO_05249
Ancylostoma duodenale
ANCDUO_05249
N
0.805
HPBE_0000602801
Heligmosomoides bakeri
HPBE_0000602801
N
0.811
HPLM_0001313801
Haemonchus placei
HPLM_0001313801
N
0.804
NBR_0001911301
Nippostrongylus brasiliensis
NBR_0001911301
N
0.786
NECAME_16964
Necator americanus
NECAME_16964
N
0.778
TELCIR_17891
Teladorsagia circumcincta
TELCIR_17891
N
0.825