CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001911301
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0001911301
T155108_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001911301-mRNA-1
C2H2 ZF
356
378
QCPFCDKRFRNEVSLKKHFVKKH
NBR_0001911301-mRNA-1
C2H2 ZF
385
403
VQCLDCFKCLPDKSHLSNH
NBR_0001911301-mRNA-1
C2H2 ZF
441
464
FKCNECNQKFLTPRKLRKHKKMSH
NBR_0001911301-mRNA-1
C2H2 ZF
470
492
YACHFCEELFTSEVSVMTHERIH
NBR_0001911301-mRNA-1
C2H2 ZF
498
521
FECKICDFRCNRYIQMENHKKEDH
NBR_0001911301-mRNA-1
C2H2 ZF
523
546
YLCSICQESYGEWAEIKNHTLSKH
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI02104000
Haemonchus contortus
HCOI02104000
N
0.786
HPLM_0001313801
Haemonchus placei
HPLM_0001313801
N
0.786
ACAC_0000942901
Angiostrongylus cantonensis
ACAC_0000942901
N
0.785
TELCIR_17891
Teladorsagia circumcincta
TELCIR_17891
N
0.785
HPBE_0000602801
Heligmosomoides bakeri
HPBE_0000602801
N
0.783
ACOC_0000498301
Angiostrongylus costaricensis
ACOC_0000498301
N
0.782
ANCCAN_26646
Ancylostoma caninum
ANCCAN_26646
N
0.771
ANCCEY_03506
Ancylostoma ceylanicum
ANCCEY_03506
N
0.771
ANCDUO_05249
Ancylostoma duodenale
ANCDUO_05249
N
0.771
NECAME_16964
Necator americanus
NECAME_16964
N
0.767