CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000602801
(
Heligmosomoides bakeri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPBE_0000602801
T154196_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000602801-mRNA-1
C2H2 ZF
198
220
QCPFCDKRFRNEVSLKKHFVKKH
HPBE_0000602801-mRNA-1
C2H2 ZF
227
245
VQCLDCFKCLPDNSHLAEH
HPBE_0000602801-mRNA-1
C2H2 ZF
283
306
FKCNECNQKFLTPRKLRKHKKMSH
HPBE_0000602801-mRNA-1
C2H2 ZF
312
334
YACHFCEELFTSEVSVMTHERIH
HPBE_0000602801-mRNA-1
C2H2 ZF
340
363
FECKICDFRCNRYIQMENHKKEDH
HPBE_0000602801-mRNA-1
C2H2 ZF
365
388
YLCSICQESFGEWAEIKNHTLSKH
Links
Other
C2H2 ZF
family TFs
Other
Heligmosomoides bakeri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000942901
Angiostrongylus cantonensis
ACAC_0000942901
N
0.773
ACOC_0000498301
Angiostrongylus costaricensis
ACOC_0000498301
N
0.770
ANCCAN_26646
Ancylostoma caninum
ANCCAN_26646
N
0.788
ANCCEY_03506
Ancylostoma ceylanicum
ANCCEY_03506
N
0.795
ANCDUO_05249
Ancylostoma duodenale
ANCDUO_05249
N
0.788
HCOI02104000
Haemonchus contortus
HCOI02104000
N
0.811
HPLM_0001313801
Haemonchus placei
HPLM_0001313801
N
0.788
NBR_0001911301
Nippostrongylus brasiliensis
NBR_0001911301
N
0.783
NECAME_16964
Necator americanus
NECAME_16964
N
0.762
TELCIR_17891
Teladorsagia circumcincta
TELCIR_17891
N
0.809