RSKR_0001095800 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0001095800 T155928_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00 		Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808 		0.815 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001095800.1 C2H2 ZF 84 106
RSKR_0001095800.1 C2H2 ZF 112 134

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_07659 Schistosoma haematobium A_07659 N
D915_02121 Fasciola hepatica D915_02121 N
SCUD_0001157701 Schistosoma curassoni SCUD_0001157701 N
Sjc_0108630 Schistosoma japonicum Sjc_0108630 N
Smp_171420 Schistosoma mansoni Smp_171420 N
SMRZ_0000860601 Schistosoma margrebowiei SMRZ_0000860601 N
SMTD_0001147801 Schistosoma mattheei SMTD_0001147801 N
SROB_0000557501 Schistosoma rodhaini SROB_0000557501 N
T265_15466 Opisthorchis viverrini T265_15466 N
TELCIR_24900 Teladorsagia circumcincta TELCIR_24900 N