CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000063401
(
Trichuris trichiura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TTRE_0000063401
T158225_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000063401
C2H2 ZF
286
308
LQCPDCSRSYSTLGGLSKHRQFH
TTRE_0000063401
C2H2 ZF
317
339
FGCKFCGKQYSTLGAMKMHIRTH
TTRE_0000063401
C2H2 ZF
343
365
CKCHLCGKAFSRPWLLQGHIRTH
TTRE_0000063401
C2H2 ZF
371
393
FCCGHCGRAFADRSNLRAHLQTH
TTRE_0000063401
C2H2 ZF
399
419
YSCKMCQKTFSRMSLLTKHAA
Links
Other
C2H2 ZF
family TFs
Other
Trichuris trichiura
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10011871
Crassostrea gigas
CGI_10011871
N
0.763
D917_07943
Trichinella nativa
D917_07943
N
0.812
D918_04200
Trichuris suis
D918_04200
N
0.819
EFV52511
Trichinella spiralis
EFV52511
N
0.812
LotgiG159035
Lottia gigantea
LotgiG159035
N
0.756
TMUE_s0044003300
Trichuris muris
TMUE_s0044003300
N
0.819