CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000809301
(
Gongylonema pulchrum
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
GPUH_0000809301
T159633_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000809301-mRNA-1
C2HC ZF
59
87
RCTTPGCTGKGHVNSNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Gongylonema pulchrum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_035470
Aspergillus clavatus
CADACLAG00003260
N
CADANGAG00002846
Aspergillus niger
CADANGAG00002846
N
ATEG_01723
Aspergillus terreus
CADATEAG00002700
N
estExt_Genewise1.C_100108
Cryphonectria parasitica
estExt_Genewise1.C_100108
N
EURHEDRAFT_360616
Aspergillus ruber
EURHEDRAFT_360616
N
F503_01917
Ophiostoma piceae uamh
F503_01917
N
OCS_04593
Ophiocordyceps sinensis
OCS_04593
N
SPBR_06595
Sporothrix brasiliensis
SPBR_06595
N