CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-par_contig_163-fgenesh-gene-0.7
(
Pythium arrhenomanes
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
maker-par_contig_163-fgenesh-gene-0.7
T160124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000014994
CBF/NF-Y
93
148
EPVYVNAKQYHRIMIRRQQRAKLEAKLGAQRQRKAYLHASRHRHAMRRPRGPGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Pythium arrhenomanes
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001218201
Angiostrongylus cantonensis
ACAC_0001218201
N
ACOC_0000329601
Angiostrongylus costaricensis
ACOC_0000329601
N
ALUE_0001180601
Ascaris lumbricoides
ALUE_0001180601
N
ANCCAN_15383
Ancylostoma caninum
ANCCAN_15383
N
ANCCEY_04433
Ancylostoma ceylanicum
ANCCEY_04433
N
ASIM_0001160201
Anisakis simplex
ASIM_0001160201
N
Bm4813
Brugia malayi
Bm4813
N
CGOC_0000927301
Cylicostephanus goldi
CGOC_0000927301
N
D917_05194
Trichinella nativa
D917_05194
N
D918_01735
Trichuris suis
D918_01735
N
DME_0000413601
Dracunculus medinensis
DME_0000413601
N
EEL_0000340601
Elaeophora elaphi
EEL_0000340601
N
EVEC_0001249101
Enterobius vermicularis
EVEC_0001249101
N
GPUH_0002215801
Gongylonema pulchrum
GPUH_0002215801
N
Hba_00636
Heterorhabditis bacteriophora
Hba_00636
N
HCOI00202100
Haemonchus contortus
HCOI00202100
N
HPLM_0000008901
Haemonchus placei
HPLM_0000008901
N
HPLM_0001566201
Haemonchus placei
HPLM_0001566201
N
L596_g21980
Steinernema carpocapsae
L596_g21980
N
L889_g15502
Steinernema feltiae
L889_g15502
N
L892_g11079
Steinernema scapterisci
L892_g11079
N
L898_g30040
Steinernema monticolum
L898_g30040
N
LOAG_06215
Loa loa
LOAG_06215
N
maker-nMf.1.1.scaf07513-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf07513-snap-gene-0.5
N
Minc04978
Meloidogyne incognita
Minc04978
N
nAv.1.0.1.g02191
Acanthocheilonema viteae
nAv.1.0.1.g02191
N
NBR_0002098301
Nippostrongylus brasiliensis
NBR_0002098301
N
nDi.2.2.2.g02408
Dirofilaria immitis
nDi.2.2.2.g02408
N
NECAME_03414
Necator americanus
NECAME_03414
N
nLs.2.1.2.g00583
Litomosoides sigmodontis
nLs.2.1.2.g00583
N
nOo.2.0.1.g01013
Onchocerca ochengi
nOo.2.0.1.g01013
N
nRc.2.0.1.g25601
Romanomermis culicivorax
nRc.2.0.1.g25601
N
OESDEN_04377
Oesophagostomum dentatum
OESDEN_04377
N
OFLC_0001358201
Onchocerca flexuosa
OFLC_0001358201
N
PPA09670
Pristionchus pacificus
PPA09670
N
PTRK_0000540400
Parastrongyloides trichosuri
PTRK_0000540400
N
RSKR_0000949900
Rhabditophanes kr3021
RSKR_0000949900
N
scaffold1561-EXSNAP2012.3
Pristionchus exspectatus
scaffold1561-EXSNAP2012.3
N
SMUV_0000007601
Syphacia muris
SMUV_0000007601
N
SPAL_0001197000
Strongyloides papillosus
SPAL_0001197000
N
SSTP_0000398400
Strongyloides stercoralis
SSTP_0000398400
N
SVE_0387200
Strongyloides venezuelensis
SVE_0387200
N
SVUK_0000871301
Strongylus vulgaris
SVUK_0000871301
N
TCLT_0000451401
Thelazia callipaeda
TCLT_0000451401
N
TCNE_0001236501
Toxocara canis
TCNE_0001236501
N
TELCIR_05319
Teladorsagia circumcincta
TELCIR_05319
N
WBGene00237735
Onchocerca volvulus
WBGene00237735
N
WUBG_10166
Wuchereria bancrofti
WUBG_10166
N