CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold1561-EXSNAP2012.3
(
Pristionchus exspectatus
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
scaffold1561-EXSNAP2012.3
T055931_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold1561-EXSNAP2012.3
Brinker
26
78
PRMSYPREFKLVVVDYFNNNGRNKYRTCKRFSITKSMLNGWISKVDKIRESRP
Links
Other
Brinker
family TFs
Other
Pristionchus exspectatus
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA09670
Pristionchus pacificus
PPA09670
N
1.000
Hba_00636
Heterorhabditis bacteriophora
Hba_00636
N
0.792
SVUK_0000871301
Strongylus vulgaris
SVUK_0000871301
N
0.783
NECAME_03414
Necator americanus
NECAME_03414
N
0.778
HCOI00202100
Haemonchus contortus
HCOI00202100
N
0.774
HPLM_0001566201
Haemonchus placei
HPLM_0001566201
N
0.774
TELCIR_05319
Teladorsagia circumcincta
TELCIR_05319
N
0.774
ANCCAN_15383
Ancylostoma caninum
ANCCAN_15383
N
0.759
ANCCEY_04433
Ancylostoma ceylanicum
ANCCEY_04433
N
0.759
L889_g15502
Steinernema feltiae
L889_g15502
N
0.759
L892_g11079
Steinernema scapterisci
L892_g11079
N
0.759
L893_g2345
Steinernema glaseri
L893_g2345
N
0.759
OESDEN_04377
Oesophagostomum dentatum
OESDEN_04377
N
0.759
ASIM_0001160201
Anisakis simplex
ASIM_0001160201
N
0.755
HPLM_0000008901
Haemonchus placei
HPLM_0000008901
N
0.755
L898_g30040
Steinernema monticolum
L898_g30040
N
0.755
PTRK_0000540400
Parastrongyloides trichosuri
PTRK_0000540400
N
0.755
RSKR_0000949900
Rhabditophanes kr3021
RSKR_0000949900
N
0.755
SPAL_0001197000
Strongyloides papillosus
SPAL_0001197000
N
0.755
SVE_0387200
Strongyloides venezuelensis
SVE_0387200
N
0.755
L596_g21980
Steinernema carpocapsae
L596_g21980
N
0.741
WUBG_10166
Wuchereria bancrofti
WUBG_10166
N
0.736
Bm4813
Brugia malayi
Bm4813
N
0.736
LOAG_06215
Loa loa
LOAG_06215
N
0.736
WBGene00237735
Onchocerca volvulus
WBGene00237735
N
0.736
ALUE_0001180601
Ascaris lumbricoides
ALUE_0001180601
N
0.736
EEL_0000340601
Elaeophora elaphi
EEL_0000340601
N
0.736
nAv.1.0.1.g02191
Acanthocheilonema viteae
nAv.1.0.1.g02191
N
0.736
nDi.2.2.2.g02408
Dirofilaria immitis
nDi.2.2.2.g02408
N
0.736
nLs.2.1.2.g00583
Litomosoides sigmodontis
nLs.2.1.2.g00583
N
0.736
nOo.2.0.1.g01013
Onchocerca ochengi
nOo.2.0.1.g01013
N
0.736
nRc.2.0.1.g25601
Romanomermis culicivorax
nRc.2.0.1.g25601
N
0.736
OFLC_0001358201
Onchocerca flexuosa
OFLC_0001358201
N
0.736
SSTP_0000398400
Strongyloides stercoralis
SSTP_0000398400
N
0.736
TCLT_0000451401
Thelazia callipaeda
TCLT_0000451401
N
0.736
TCNE_0001236501
Toxocara canis
TCNE_0001236501
N
0.736
NBR_0002098301
Nippostrongylus brasiliensis
NBR_0002098301
N
0.723
D917_05194
Trichinella nativa
D917_05194
N
0.722
D918_01735
Trichuris suis
D918_01735
N
0.722
ACOC_0000329601
Angiostrongylus costaricensis
ACOC_0000329601
N
0.717
DME_0000413601
Dracunculus medinensis
DME_0000413601
N
0.717
GPUH_0002215801
Gongylonema pulchrum
GPUH_0002215801
N
0.717
ACAC_0001218201
Angiostrongylus cantonensis
ACAC_0001218201
N
0.712