Lus10016873.g (Linum usitatissimum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Lus10016873.g T163547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016873 CG-1 35 121

Links

Other CG-1 family TFs
Other Linum usitatissimum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10003120m.g Citrus clementina Ciclev10003120m.g N 0.000
Eucgr.H00931 Eucalyptus grandis Eucgr.H00931 N 0.000
evm.TU.supercontig_1782.2 Carica papaya evm.TU.supercontig_1782.2 N 0.000
gene31321-v1.0-hybrid Fragaria vesca gene31321-v1.0-hybrid N 0.000
Gorai.010G045600 Gossypium raimondii Gorai.010G045600 N 0.000
MDP0000250947 Malus domestica MDP0000250947 N 0.000
orange1.1g045277m.g Citrus sinensis orange1.1g045277m.g N 0.000
Pm019140 Prunus mume Pm019140 N 0.000
PRUPE_ppa024363mg Prunus persica PRUPE_ppa024363mg N 0.000
SapurV1A.0331s0170 Salix purpurea SapurV1A.0331s0170 N 0.000
TCM_034992 Theobroma cacao TCM_034992 I 0.000