Lus10016873.g (Linum usitatissimum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Lus10016873.g T163547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016873 CG-1 35 121

Links

Other CG-1 family TFs
Other Linum usitatissimum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G15350 Glycine max GLYMA15G15350 I 0.782
Cla009415 Citrullus lanatus Cla009415 I 0.770
MDP0000164873 Malus domestica MDP0000164873 I 0.770
MDP0000167705 Malus domestica MDP0000167705 I 0.770
MDP0000233860 Malus domestica MDP0000233860 I 0.770
GLYMA07G37090 Glycine max GLYMA07G37090 I 0.759
GLYMA17G03510 Glycine max GLYMA17G03510 I 0.759
TCM_021327 Theobroma cacao TCM_021327 I 0.759
Cucsa.325250 Cucumis sativus Cucsa.325250 I 0.759
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I 0.759
CAMTA5 Arabidopsis thaliana AT4G16150 D 0.747
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I 0.747
Solyc01g060170.2 Solanum lycopersicum Solyc01g060170.2 I 0.747
Gorai.006G079000 Gossypium raimondii Gorai.006G079000 I 0.747
Lus10036455.g Linum usitatissimum Lus10036455.g I 0.747
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I 0.747
MTR_4g121840 Medicago truncatula MTR_4g121840 I 0.736
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I 0.736
Ca_02997 Cicer arietinum Ca_02997 I 0.736
mgf012030m Mimulus guttatus mgf012030m I 0.736
mgf013655m Mimulus guttatus mgf013655m I 0.736
Eucgr.H04035 Eucalyptus grandis Eucgr.H04035 I 0.736
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I 0.736
gene05160-v1.0-hybrid Fragaria vesca gene05160-v1.0-hybrid N 0.736
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I 0.736
Lus10041126.g Linum usitatissimum Lus10041126.g I 0.736
SapurV1A.0060s0130 Salix purpurea SapurV1A.0060s0130 I 0.736
AT3G16940 Arabidopsis thaliana AT3G16940 I 0.724
POPTR_0010s15160 Populus trichocarpa POPTR_0010s15160 I 0.724
cassava40488.m1 Manihot esculenta cassava40488.m1 I 0.724
Bostr.19424s0974 Boechera stricta Bostr.19424s0974 I 0.724
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I 0.724
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I 0.724
Bo8g043280 Brassica oleracea Bo8g043280 I 0.713
fgenesh1_pm.C_scaffold_3001474 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001474 I 0.713
Bostr.30275s0060 Boechera stricta Bostr.30275s0060 I 0.713
Gorai.005G065700 Gossypium raimondii Gorai.005G065700 I 0.713
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I 0.713
PK20811.1 Cannabis sativa PK20811.1 I 0.713
Bra038040 Brassica rapa Bra038040 I 0.701
Cagra.4396s0001 Capsella grandiflora Cagra.4396s0001 I 0.701