CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000009731
(
Lepisosteus oculatus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSLOCG00000009731
T166075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
1.000
1.000
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
1.000
1.000
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
1.000
1.000
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
1.000
1.000
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
1.000
1.000
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
1.000
1.000
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
1.000
1.000
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
1.000
1.000
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
1.000
1.000
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
1.000
1.000
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
1.000
1.000
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
1.000
1.000
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
1.000
1.000
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.794
0.794
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.794
0.794
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000011883
CSL
35
165
VLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNAD
ENSLOCP00000011892
CSL
32
162
VLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Lepisosteus oculatus
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009401
Calypte anna
Aan_R009401
I
Afo_R013761
Aptenodytes forsteri
Afo_R013761
I
Brh_R009359
Buceros rhinoceros
Brh_R009359
I
Cmyd_10017122
Chelonia mydas
Cmyd_10017122
I
ENSAMXG00000025867
Astyanax mexicanus
ENSAMXG00000025867
I
ENSAPLG00000001864
Anas platyrhynchos
ENSAPLG00000001864
I
ZBTB26
Bos taurus
ENSBTAG00000038610
I
ENSBTAP00000040938-D2
Bos grunniens
ENSBTAP00000040938-D2
I
ENSBTAP00000052774-D5
Bos grunniens
ENSBTAP00000052774-D5
I
ZBTB26
Callithrix jacchus
ENSCJAG00000021770
I
ENSCSAG00000019712
Chlorocebus sabaeus
ENSCSAG00000019712
I
ZBTB26
Danio rerio
ENSDARG00000028949
I
ZBTB26
Dasypus novemcinctus
ENSDNOG00000045813
I
Zbtb26
Dipodomys ordii
ENSDORG00000006402
I
ZBTB26
Equus caballus
ENSECAG00000017397
I
ZBTB26
Echinops telfairi
ENSETEG00000009868
I
ENSFALG00000014341
Ficedula albicollis
ENSFALG00000014341
I
ZBTB26
Homo sapiens
ENSG00000171448
D
si:ch211-236k19.4
Gasterosteus aculeatus
ENSGACG00000013351
I
ENSGALG00000001236
Gallus gallus
ENSGALG00000001236
I
ZBTB26
Gorilla gorilla
ENSGGOG00000015134
I
ENSGMOG00000002798
Gadus morhua
ENSGMOG00000002798
I
ZBTB26
Loxodonta africana
ENSLAFG00000012394
I
ENSLOCG00000002911
Lepisosteus oculatus
ENSLOCG00000002911
I
ZBTB26
Myotis lucifugus
ENSMLUG00000014009
I
ZBTB26
Macaca mulatta
ENSMMUG00000000495
I
ZBTB26
Monodelphis domestica
ENSMODG00000023552
I
ENSMPUG00000019237
Mustela putorius furo
ENSMPUG00000019237
I
Zbtb26
Mus musculus
ENSMUSG00000050714
I
ENSNLEG00000017215
Nomascus leucogenys
ENSNLEG00000017215
I
ENSOARG00000019156
Ovis aries
ENSOARG00000019156
I
ZBTB26
Otolemur garnettii
ENSOGAG00000010685
I
ENSONIG00000020657
Oreochromis niloticus
ENSONIG00000020657
I
ZBTB26
Ochotona princeps
ENSOPRG00000013334
I
si:ch211-236k19.4
Oryzias latipes
ENSORLG00000015695
I
ENSP00000362760
Macaca fascicularis
ENSP00000362760
I
ENSPANG00000025839
Papio anubis
ENSPANG00000025839
I
ZBTB26
Procavia capensis
ENSPCAG00000010332
I
ENSPFOG00000001590
Poecilia formosa
ENSPFOG00000001590
I
ENSPPYG00000019585
Pongo abelii
ENSPPYG00000019585
I
ENSPSIG00000001041
Pelodiscus sinensis
ENSPSIG00000001041
I
ZBTB26
Pan troglodytes
ENSPTRG00000021341
I
ZBTB26
Pteropus vampyrus
ENSPVAG00000017595
I
Zbtb26
Rattus norvegicus
ENSRNOG00000009346
I
ENSSHAG00000008190
Sarcophilus harrisii
ENSSHAG00000008190
I
ENSSSCG00000005577
Sus scrofa
ENSSSCG00000005577
I
ENSSSCG00000005580
Sus scrofa
ENSSSCG00000005580
I
ENSSTOG00000004739
Ictidomys tridecemlineatus
ENSSTOG00000004739
I
ZBTB26
Taeniopygia guttata
ENSTGUG00000018200
I
si:ch211-236k19.4
Tetraodon nigroviridis
ENSTNIG00000011438
I
ZBTB26
Tursiops truncatus
ENSTTRG00000016957
I
ENSXMAG00000019575
Xiphophorus maculatus
ENSXMAG00000019575
I
Gfo_R007917
Geospiza fortis
Gfo_R007917
I
Myotis_brandtii_ZBTB26_10028431
Myotis brandtii
Myotis_brandtii_ZBTB26_10028431
I
Ogr13905
Ophisaurus gracilis
Ogr13905
I
Pvit_08508
Pogona vitticeps
Pvit_08508
I
Tal_R003614
Tyto alba
Tal_R003614
I
zbtb26
Xenopus tropicalis
XB-GENE-5891654
I