CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000009731
(
Lepisosteus oculatus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSLOCG00000009731
T166075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
1.000
1.000
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
1.000
1.000
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
1.000
1.000
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
1.000
1.000
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
1.000
1.000
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
1.000
1.000
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
1.000
1.000
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
1.000
1.000
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
1.000
1.000
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
1.000
1.000
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
1.000
1.000
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
1.000
1.000
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
1.000
1.000
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.794
0.794
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.794
0.794
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000011883
CSL
35
165
VLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNAD
ENSLOCP00000011892
CSL
32
162
VLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Lepisosteus oculatus
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Anolis carolinensis
ENSACAG00000014578
I
1.000
ENSAMEG00000018082
Ailuropoda melanoleuca
ENSAMEG00000018082
I
1.000
RBPJ
Bos taurus
ENSBTAG00000003602
I
1.000
RBPJ
Canis familiaris
ENSCAFG00000016387
I
1.000
RBPJ
Choloepus hoffmanni
ENSCHOG00000001582
I
1.000
RBPJ
Callithrix jacchus
ENSCJAG00000021033
I
1.000
RBPJ
Dasypus novemcinctus
ENSDNOG00000035383
I
1.000
Rbpj
Dipodomys ordii
ENSDORG00000006352
I
1.000
RBPJ
Equus caballus
ENSECAG00000019257
I
1.000
RBPJ
Erinaceus europaeus
ENSEEUG00000009686
I
1.000
RBPJ
Homo sapiens
ENSG00000168214
D
1.000
RBPJ
Gorilla gorilla
ENSGGOG00000004582
I
1.000
ENSLACG00000007296
Latimeria chalumnae
ENSLACG00000007296
I
1.000
RBPJ
Loxodonta africana
ENSLAFG00000000410
I
1.000
RBPJ
Myotis lucifugus
ENSMLUG00000017187
I
1.000
RBPJ
Macaca mulatta
ENSMMUG00000015828
I
1.000
ENSMPUG00000016715
Mustela putorius furo
ENSMPUG00000016715
I
1.000
Rbpj
Mus musculus
ENSMUSG00000039191
D
1.000
ENSNLEG00000016895
Nomascus leucogenys
ENSNLEG00000016895
I
1.000
RBPJ
Ornithorhynchus anatinus
ENSOANG00000006699
I
1.000
ENSOARG00000008166
Ovis aries
ENSOARG00000008166
I
1.000
RBPJ
Oryctolagus cuniculus
ENSOCUG00000013449
I
1.000
RBPJ
Otolemur garnettii
ENSOGAG00000007913
I
1.000
ENSPANG00000021176
Papio anubis
ENSPANG00000021176
I
1.000
ENSPPYG00000014652
Pongo abelii
ENSPPYG00000014652
I
1.000
ENSPSIG00000016822
Pelodiscus sinensis
ENSPSIG00000016822
I
1.000
RBPJ
Pan troglodytes
ENSPTRG00000015968
I
1.000
RBPJ
Pteropus vampyrus
ENSPVAG00000014199
I
1.000
Rbpj
Rattus norvegicus
ENSRNOG00000046327
I
1.000
RBPJ
Sorex araneus
ENSSARG00000001169
I
1.000
RBPJ
Sus scrofa
ENSSSCG00000022155
I
1.000
ENSSTOG00000004547
Ictidomys tridecemlineatus
ENSSTOG00000004547
I
1.000
RBPJ
Tupaia belangeri
ENSTBEG00000002676
I
1.000
ENSTSYG00000001894
Tarsius syrichta
ENSTSYG00000001894
I
1.000
RBPJ
Tursiops truncatus
ENSTTRG00000009022
I
1.000
Alligator_sinensis_CCG006987.1
Alligator sinensis
Alligator_sinensis_CCG006987.1
I
1.000
Cmyd_10010997
Chelonia mydas
Cmyd_10010997
I
1.000
ENSBTAP00000004696-D1
Bos grunniens
ENSBTAP00000004696-D1
I
1.000
ENSP00000354528
Macaca fascicularis
ENSP00000354528
I
1.000
Myotis_brandtii_RBPJ_10027377
Myotis brandtii
Myotis_brandtii_RBPJ_10027377
I
1.000
Pvit_10584
Pogona vitticeps
Pvit_10584
I
1.000
rbpj
Xenopus tropicalis
XB-GENE-490756
I
1.000
ENSAPLG00000007512
Anas platyrhynchos
ENSAPLG00000007512
I
0.992
ENSFALG00000009154
Ficedula albicollis
ENSFALG00000009154
I
0.992
RBPJ
Gallus gallus
ENSGALG00000014365
I
0.992
RBPJ
Monodelphis domestica
ENSMODG00000000129
I
0.992
ENSSHAG00000003329
Sarcophilus harrisii
ENSSHAG00000003329
I
0.992
RBPJ
Taeniopygia guttata
ENSTGUG00000009245
I
0.992
Aan_R011115
Calypte anna
Aan_R011115
I
0.992
Afo_R009248
Aptenodytes forsteri
Afo_R009248
I
0.992
Brh_R001357
Buceros rhinoceros
Brh_R001357
I
0.992
Gfo_R010339
Geospiza fortis
Gfo_R010339
I
0.992
Ogr02745
Ophisaurus gracilis
Ogr02745
I
0.992
Tal_R001466
Tyto alba
Tal_R001466
I
0.992
AAB05479
Xenopus laevis
AAB05479
I
0.992
rbpj.S
Xenopus laevis
XB-GENE-865998
I
0.992
RBPJ
Takifugu rubripes
ENSTRUG00000014798
I
0.985
RBPJ
Tetraodon nigroviridis
ENSTNIG00000012994
I
0.977
rbpjb
Danio rerio
ENSDARG00000052091
I
0.969
ENSONIG00000009281
Oreochromis niloticus
ENSONIG00000009281
I
0.969
ENSPFOG00000012004
Poecilia formosa
ENSPFOG00000012004
I
0.969
ENSXMAG00000009877
Xiphophorus maculatus
ENSXMAG00000009877
I
0.969
RBPJ
Meleagris gallopavo
ENSMGAG00000012418
I
0.962
RBPJ
Vicugna pacos
ENSVPAG00000003620
I
0.959
ENSAMXG00000010835
Astyanax mexicanus
ENSAMXG00000010835
I
0.954
RBPJ
Felis catus
ENSFCAG00000030363
I
0.954
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.944
RBPJ
Cavia porcellus
ENSCPOG00000007041
I
0.937
ENSGMOG00000006156
Gadus morhua
ENSGMOG00000006156
I
0.935
rbpja
Danio rerio
ENSDARG00000003398
I
0.931
Rbpj
Rattus norvegicus
ENSRNOG00000007797
I
0.931
ENSAMXG00000011180
Astyanax mexicanus
ENSAMXG00000011180
I
0.930
ENSGMOG00000004951
Gadus morhua
ENSGMOG00000004951
I
0.907
rbpja
Gasterosteus aculeatus
ENSGACG00000015888
I
0.891
ENSONIG00000008873
Oreochromis niloticus
ENSONIG00000008873
I
0.870
ENSPPYG00000019874
Pongo abelii
ENSPPYG00000019874
I
0.856
Ocbimv22031643m.g
Octopus bimaculoides
Ocbimv22031643m.g
I
0.855
fgenesh2_pg.scaffold_82000019
Branchiostoma floridae
fgenesh2_pg.scaffold_82000019
I
0.847
Sakowv30027441m.g
Saccoglossus kowalevskii
Sakowv30027441m.g
I
0.847
fgenesh2_pg.scaffold_60000013
Branchiostoma floridae
fgenesh2_pg.scaffold_60000013
I
0.840
rbpja
Oryzias latipes
ENSORLG00000004882
I
0.837
Sjc_0108400
Schistosoma japonicum
Sjc_0108400
I
0.833
D915_08967
Fasciola hepatica
D915_08967
I
0.833
SCUD_0000326701
Schistosoma curassoni
SCUD_0000326701
I
0.833
SMRZ_0000802101
Schistosoma margrebowiei
SMRZ_0000802101
I
0.833
SMTD_0001089601
Schistosoma mattheei
SMTD_0001089601
I
0.833
TRE_0000568701
Trichobilharzia regenti
TRE_0000568701
I
0.833
CGI_10018383
Crassostrea gigas
CGI_10018383
I
0.832
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.824
ENSXMAG00000012207
Xiphophorus maculatus
ENSXMAG00000012207
I
0.822
ENSORLG00000006995
Oryzias latipes
ENSORLG00000006995
I
0.817
SMAR001432
Strigamia maritima
SMAR001432
I
0.817
NV17858
Nasonia vitripennis
NV17858
I
0.809
ENSPFOG00000016494
Poecilia formosa
ENSPFOG00000016494
I
0.806
CapteG179039
Capitella teleta
CapteG179039
I
0.802
TC014468
Tribolium castaneum
TC014468
I
0.802
LDEC018359
Leptinotarsa decemlineata
LDEC018359
I
0.802
ACEP17167
Atta cephalotes
ACEP17167
I
0.800
GB45655
Apis mellifera
GB45655
I
0.800
HMEL017244
Heliconius melpomene
HMEL017244
I
0.800
KGM_08407
Danaus plexippus
KGM_08407
I
0.800
SINV15808
Solenopsis invicta
SINV15808
I
0.800
YQE_03219
Dendroctonus ponderosae
YQE_03219
I
0.800
Cflo_01916--XP_397309.1_APIME
Camponotus floridanus
Cflo_01916--XP_397309.1_APIME
I
0.800
tetur04g02700
Tetranychus urticae
tetur04g02700
I
0.798
tetur04g02730
Tetranychus urticae
tetur04g02730
I
0.798
Su(H)
Drosophila melanogaster
FBgn0004837
D
0.794
Su(H)
Drosophila simulans
FBgn0027417
I
0.794
GF14905
Drosophila ananassae
FBgn0091930
I
0.794
GG25142
Drosophila erecta
FBgn0117267
I
0.794
GH10915
Drosophila grimshawi
FBgn0118396
I
0.794
GL26026
Drosophila persimilis
FBgn0163608
I
0.794
GM15894
Drosophila sechellia
FBgn0170810
I
0.794
GJ11880
Drosophila virilis
FBgn0199134
I
0.794
GE20814
Drosophila yakuba
FBgn0238107
I
0.794
GA25242
Drosophila pseudoobscura
FBgn0246623
I
0.794
GA25243
Drosophila pseudoobscura
FBgn0246624
I
0.794
L798_15068
Zootermopsis nevadensis
L798_15068
I
0.794
LotgiG159505
Lottia gigantea
LotgiG159505
I
0.794
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
0.786
GI13259
Drosophila mojavensis
FBgn0136016
I
0.786
ISCW010197
Ixodes scapularis
ISCW010197
I
0.786
Hsal_09918--XP_397309.1_APIME
Harpegnathos saltator
Hsal_09918--XP_397309.1_APIME
I
0.786
LCUP003485
Lucilia cuprina
LCUP003485
I
0.786
MDOA002342
Musca domestica
MDOA002342
I
0.786
AAEL006419
Aedes aegypti
AAEL006419
I
0.779
DAPPUDRAFT_98470
Daphnia pulex
DAPPUDRAFT_98470
I
0.779
PHUM462870
Pediculus humanus
PHUM462870
I
0.779
CLEC005205
Cimex lectularius
CLEC005205
I
0.779
AQUA011533
Anopheles quadriannulatus
AQUA011533
I
0.774
AGAP008935
Anopheles gambiae
AGAP008935
I
0.771
tetur11g00180
Tetranychus urticae
tetur11g00180
I
0.771
AALB007981
Anopheles albimanus
AALB007981
I
0.771
ACOM040639
Anopheles coluzzii
ACOM040639
I
0.771
ACUA014515
Anopheles culicifacies
ACUA014515
I
0.771
ADIR011431
Anopheles dirus
ADIR011431
I
0.771
AFAF012186
Anopheles farauti
AFAF012186
I
0.771
AFUN007280
Anopheles funestus
AFUN007280
I
0.771
AMEM004324
Anopheles merus
AMEM004324
I
0.771
AMIN005880
Anopheles minimus
AMIN005880
I
0.771
HHAL001644-PA
Halyomorpha halys
HHAL001644-PA
I
0.769
CpipJ_CPIJ004183
Culex pipiens
CpipJ_CPIJ004183
I
0.766
CPIJ004183
Culex quinquefasciatus
CPIJ004183
I
0.766
MESCA005881
Megaselia scalaris
MESCA005881
I
0.765
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
AATE009298
Anopheles atroparvus
AATE009298
I
0.763
ASTEI01929
Anopheles stephensi
ASTEI01929
I
0.763
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.762
ASIS021327
Anopheles sinensis
ASIS021327
I
0.760
NV17967
Nasonia vitripennis
NV17967
I
0.750
AEPI005106
Anopheles epiroticus
AEPI005106
I
0.736
AARA009493
Anopheles arabiensis
AARA009493
I
0.733
AMEC017285
Anopheles melas
AMEC017285
I
0.733
SMUV_0001013801
Syphacia muris
SMUV_0001013801
I
0.727
AMAM009373
Anopheles maculatus
AMAM009373
I
0.725
ACYPI001225
Acyrthosiphon pisum
ACYPI001225
I
0.723
ENSCSAVG00000010744
Ciona savignyi
ENSCSAVG00000010744
I
0.721
ADAC001896
Anopheles darlingi
ADAC001896
I
0.719
LLOJ000759
Lutzomyia longipalpis
LLOJ000759
I
0.718
NECAME_17145
Necator americanus
NECAME_17145
I
0.714
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
0.714
D915_08968
Fasciola hepatica
D915_08968
I
0.712
LLOJ000758
Lutzomyia longipalpis
LLOJ000758
I
0.711
su(h)
Ciona intestinalis
ENSCING00000000838
I
0.708
ACYPI009607
Acyrthosiphon pisum
ACYPI009607
I
0.702