rbpj.S (Xenopus laevis)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 XB-GENE-865998 T166352_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.992 0.992
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.992 0.992
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.992 0.992
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.992 0.992
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.992 0.992
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.992 0.992
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.992 0.992
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.992 0.992
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.992 0.992
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.992 0.992
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.992 0.992
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.992 0.992
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.992 0.992
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.786 0.786
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAB05478 CSL 49 179
AAI33205 CSL 35 165

Links

Other CSL family TFs
Other Xenopus laevis TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB05479 Xenopus laevis AAB05479 I 1.000
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.992
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.992
RBPJ Bos taurus ENSBTAG00000003602 I 0.992
RBPJ Canis familiaris ENSCAFG00000016387 I 0.992
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.992
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.992
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.992
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.992
RBPJ Equus caballus ENSECAG00000019257 I 0.992
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.992
RBPJ Homo sapiens ENSG00000168214 D 0.992
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.992
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.992
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.992
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.992
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.992
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.992
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.992
Rbpj Mus musculus ENSMUSG00000039191 D 0.992
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.992
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.992
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.992
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.992
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.992
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.992
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.992
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.992
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.992
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.992
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.992
RBPJ Sorex araneus ENSSARG00000001169 I 0.992
RBPJ Sus scrofa ENSSSCG00000022155 I 0.992
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.992
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.992
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.992
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.992
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.992
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.992
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.992
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.992
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.992
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.992
rbpj Xenopus tropicalis XB-GENE-490756 I 0.992
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.985
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.985
RBPJ Gallus gallus ENSGALG00000014365 I 0.985
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.985
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.985
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.985
Aan_R011115 Calypte anna Aan_R011115 I 0.985
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.985
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.985
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.985
Tal_R001466 Tyto alba Tal_R001466 I 0.985
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.983
rbpjb Danio rerio ENSDARG00000052091 I 0.977
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.977
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.969
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.962
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.962
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.962
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.954
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.947
RBPJ Felis catus ENSFCAG00000030363 I 0.946
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.944
rbpja Danio rerio ENSDARG00000003398 I 0.939
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.924
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.916
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.901
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.901
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.885
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.878
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.847
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.847
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.840
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.840
rbpja Oryzias latipes ENSORLG00000004882 I 0.837
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.824
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.817
CapteG179039 Capitella teleta CapteG179039 I 0.809
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.809
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.809
SMAR001432 Strigamia maritima SMAR001432 I 0.809
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.802
NV17858 Nasonia vitripennis NV17858 I 0.802
TC014468 Tribolium castaneum TC014468 I 0.794
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.794
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.791
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.791
ACEP17167 Atta cephalotes ACEP17167 I 0.786
Su(H) Drosophila melanogaster FBgn0004837 D 0.786
Su(H) Drosophila simulans FBgn0027417 I 0.786
GF14905 Drosophila ananassae FBgn0091930 I 0.786
GG25142 Drosophila erecta FBgn0117267 I 0.786
GH10915 Drosophila grimshawi FBgn0118396 I 0.786
GL26026 Drosophila persimilis FBgn0163608 I 0.786
GM15894 Drosophila sechellia FBgn0170810 I 0.786
GJ11880 Drosophila virilis FBgn0199134 I 0.786
GE20814 Drosophila yakuba FBgn0238107 I 0.786
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.786
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.786
GB45655 Apis mellifera GB45655 I 0.786
HMEL017244 Heliconius melpomene HMEL017244 I 0.786
KGM_08407 Danaus plexippus KGM_08407 I 0.786
L798_15068 Zootermopsis nevadensis L798_15068 I 0.786
LotgiG159505 Lottia gigantea LotgiG159505 I 0.786
SINV15808 Solenopsis invicta SINV15808 I 0.786
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.786
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.786
AGAP008935 Anopheles gambiae AGAP008935 I 0.779
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.779
GI13259 Drosophila mojavensis FBgn0136016 I 0.779
ISCW010197 Ixodes scapularis ISCW010197 I 0.779
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.779
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.779
LCUP003485 Lucilia cuprina LCUP003485 I 0.779
AALB007981 Anopheles albimanus AALB007981 I 0.779
ACOM040639 Anopheles coluzzii ACOM040639 I 0.779
ACUA014515 Anopheles culicifacies ACUA014515 I 0.779
ADIR011431 Anopheles dirus ADIR011431 I 0.779
AFAF012186 Anopheles farauti AFAF012186 I 0.779
AFUN007280 Anopheles funestus AFUN007280 I 0.779
AMEM004324 Anopheles merus AMEM004324 I 0.779
AMIN005880 Anopheles minimus AMIN005880 I 0.779
MDOA002342 Musca domestica MDOA002342 I 0.779
AAEL006419 Aedes aegypti AAEL006419 I 0.771
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.771
PHUM462870 Pediculus humanus PHUM462870 I 0.771
CLEC005205 Cimex lectularius CLEC005205 I 0.771
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.771
AATE009298 Anopheles atroparvus AATE009298 I 0.771
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.771
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
MESCA005881 Megaselia scalaris MESCA005881 I 0.758
NV17967 Nasonia vitripennis NV17967 I 0.748
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.740
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.740
AARA009493 Anopheles arabiensis AARA009493 I 0.740
AMEC017285 Anopheles melas AMEC017285 I 0.740
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.740
AEPI005106 Anopheles epiroticus AEPI005106 I 0.733
AMAM009373 Anopheles maculatus AMAM009373 I 0.733
ASIS021327 Anopheles sinensis ASIS021327 I 0.733
ADAC001896 Anopheles darlingi ADAC001896 I 0.729
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.725
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.718
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.710
su(h) Ciona intestinalis ENSCING00000000838 I 0.710
NEMVEDRAFT_v1g206550 Nematostella vectensis NEMVEDRAFT_v1g206550 N 0.710