RBPJ (Tetraodon nigroviridis)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSTNIG00000012994 T166136_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.977 0.977
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.977 0.977
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.977 0.977
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.977 0.977
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.977 0.977
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.977 0.977
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.977 0.977
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.977 0.977
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.977 0.977
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.977 0.977
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.977 0.977
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.977 0.977
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.977 0.977
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.786 0.786
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015973 CSL 35 165

Links

Other CSL family TFs
Other Tetraodon nigroviridis TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.992
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.977
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.977
RBPJ Bos taurus ENSBTAG00000003602 I 0.977
RBPJ Canis familiaris ENSCAFG00000016387 I 0.977
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.977
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.977
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.977
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.977
RBPJ Equus caballus ENSECAG00000019257 I 0.977
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.977
RBPJ Homo sapiens ENSG00000168214 D 0.977
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.977
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.977
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.977
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.977
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.977
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.977
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.977
Rbpj Mus musculus ENSMUSG00000039191 D 0.977
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.977
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.977
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.977
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.977
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.977
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.977
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.977
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.977
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.977
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.977
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.977
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.977
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.977
RBPJ Sorex araneus ENSSARG00000001169 I 0.977
RBPJ Sus scrofa ENSSSCG00000022155 I 0.977
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.977
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.977
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.977
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.977
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.977
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.977
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.977
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.977
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.977
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.977
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.977
rbpj Xenopus tropicalis XB-GENE-490756 I 0.977
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.969
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.969
RBPJ Gallus gallus ENSGALG00000014365 I 0.969
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.969
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.969
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.969
Aan_R011115 Calypte anna Aan_R011115 I 0.969
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.969
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.969
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.969
Tal_R001466 Tyto alba Tal_R001466 I 0.969
AAB05479 Xenopus laevis AAB05479 I 0.969
rbpj.S Xenopus laevis XB-GENE-865998 I 0.969
rbpjb Danio rerio ENSDARG00000052091 I 0.962
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.947
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.939
rbpja Danio rerio ENSDARG00000003398 I 0.924
RBPJ Felis catus ENSFCAG00000030363 I 0.924
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.908
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.901
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.885
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.885
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.870
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.870
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.863
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.847
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.840
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.832
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.824
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.824
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.824
rbpja Oryzias latipes ENSORLG00000004882 I 0.822
SMAR001432 Strigamia maritima SMAR001432 I 0.809
NV17858 Nasonia vitripennis NV17858 I 0.802
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.794
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.794
TC014468 Tribolium castaneum TC014468 I 0.794
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.794
ACEP17167 Atta cephalotes ACEP17167 I 0.786
CapteG179039 Capitella teleta CapteG179039 I 0.786
Su(H) Drosophila melanogaster FBgn0004837 D 0.786
Su(H) Drosophila simulans FBgn0027417 I 0.786
GF14905 Drosophila ananassae FBgn0091930 I 0.786
GG25142 Drosophila erecta FBgn0117267 I 0.786
GH10915 Drosophila grimshawi FBgn0118396 I 0.786
GL26026 Drosophila persimilis FBgn0163608 I 0.786
GM15894 Drosophila sechellia FBgn0170810 I 0.786
GJ11880 Drosophila virilis FBgn0199134 I 0.786
GE20814 Drosophila yakuba FBgn0238107 I 0.786
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.786
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.786
GB45655 Apis mellifera GB45655 I 0.786
HMEL017244 Heliconius melpomene HMEL017244 I 0.786
KGM_08407 Danaus plexippus KGM_08407 I 0.786
L798_15068 Zootermopsis nevadensis L798_15068 I 0.786
LotgiG159505 Lottia gigantea LotgiG159505 I 0.786
SINV15808 Solenopsis invicta SINV15808 I 0.786
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.786
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.786
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.779
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.779
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.779
GI13259 Drosophila mojavensis FBgn0136016 I 0.779
ISCW010197 Ixodes scapularis ISCW010197 I 0.779
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.779
LCUP003485 Lucilia cuprina LCUP003485 I 0.779
MDOA002342 Musca domestica MDOA002342 I 0.779
AAEL006419 Aedes aegypti AAEL006419 I 0.771
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.771
PHUM462870 Pediculus humanus PHUM462870 I 0.771
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.771
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.771
CLEC005205 Cimex lectularius CLEC005205 I 0.771
AGAP008935 Anopheles gambiae AGAP008935 I 0.763
MESCA005881 Megaselia scalaris MESCA005881 I 0.763
AALB007981 Anopheles albimanus AALB007981 I 0.763
ACOM040639 Anopheles coluzzii ACOM040639 I 0.763
ACUA014515 Anopheles culicifacies ACUA014515 I 0.763
ADIR011431 Anopheles dirus ADIR011431 I 0.763
AFAF012186 Anopheles farauti AFAF012186 I 0.763
AFUN007280 Anopheles funestus AFUN007280 I 0.763
AMEM004324 Anopheles merus AMEM004324 I 0.763
AMIN005880 Anopheles minimus AMIN005880 I 0.763
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.756
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.756
AATE009298 Anopheles atroparvus AATE009298 I 0.756
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.756
NV17967 Nasonia vitripennis NV17967 I 0.748
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.740
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.740
AARA009493 Anopheles arabiensis AARA009493 I 0.725
AMEC017285 Anopheles melas AMEC017285 I 0.725
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.725
ADAC001896 Anopheles darlingi ADAC001896 I 0.719
AEPI005106 Anopheles epiroticus AEPI005106 I 0.718
AMAM009373 Anopheles maculatus AMAM009373 I 0.718
ASIS021327 Anopheles sinensis ASIS021327 I 0.718
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.710
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.710
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.710