rbpja (Oryzias latipes)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSORLG00000004882 T166104_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.837 0.837
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.837 0.837
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.837 0.837
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.837 0.837
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.837 0.837
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.837 0.837
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.837 0.837
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.837 0.837
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.837 0.837
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.837 0.837
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.837 0.837
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.837 0.837
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.837 0.837
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.736 0.736
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006149 CSL 35 165
ENSORLP00000006152 CSL 35 165
ENSORLP00000006154 CSL 39 169

Links

Other CSL family TFs
Other Oryzias latipes TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.899
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.891
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.860
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.860
rbpja Danio rerio ENSDARG00000003398 I 0.853
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.845
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.845
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.845
RBPJ Gallus gallus ENSGALG00000014365 I 0.845
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.845
Aan_R011115 Calypte anna Aan_R011115 I 0.845
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.845
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.845
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.845
Tal_R001466 Tyto alba Tal_R001466 I 0.845
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.837
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.837
RBPJ Bos taurus ENSBTAG00000003602 I 0.837
RBPJ Canis familiaris ENSCAFG00000016387 I 0.837
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.837
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.837
rbpjb Danio rerio ENSDARG00000052091 I 0.837
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.837
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.837
RBPJ Equus caballus ENSECAG00000019257 I 0.837
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.837
RBPJ Homo sapiens ENSG00000168214 D 0.837
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.837
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.837
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.837
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.837
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.837
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.837
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.837
Rbpj Mus musculus ENSMUSG00000039191 D 0.837
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.837
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.837
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.837
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.837
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.837
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.837
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.837
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.837
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.837
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.837
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.837
RBPJ Sorex araneus ENSSARG00000001169 I 0.837
RBPJ Sus scrofa ENSSSCG00000022155 I 0.837
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.837
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.837
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.837
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.837
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.837
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.837
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.837
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.837
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.837
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.837
AAB05479 Xenopus laevis AAB05479 I 0.837
rbpj Xenopus tropicalis XB-GENE-490756 I 0.837
rbpj.S Xenopus laevis XB-GENE-865998 I 0.837
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.829
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.829
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.829
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.829
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.829
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.822
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.822
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.822
RBPJ Felis catus ENSFCAG00000030363 I 0.814
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.814
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.814
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.798
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.775
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.775
L798_15068 Zootermopsis nevadensis L798_15068 I 0.775
ACEP17167 Atta cephalotes ACEP17167 I 0.767
GB45655 Apis mellifera GB45655 I 0.767
HMEL017244 Heliconius melpomene HMEL017244 I 0.767
KGM_08407 Danaus plexippus KGM_08407 I 0.767
NV17858 Nasonia vitripennis NV17858 I 0.767
SINV15808 Solenopsis invicta SINV15808 I 0.767
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.767
SMAR001432 Strigamia maritima SMAR001432 I 0.760
TC014468 Tribolium castaneum TC014468 I 0.760
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.760
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.760
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.760
PHUM462870 Pediculus humanus PHUM462870 I 0.752
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.752
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.752
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.752
CLEC005205 Cimex lectularius CLEC005205 I 0.752
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.744
Su(H) Drosophila melanogaster FBgn0004837 D 0.736
Su(H) Drosophila simulans FBgn0027417 I 0.736
GF14905 Drosophila ananassae FBgn0091930 I 0.736
GG25142 Drosophila erecta FBgn0117267 I 0.736
GH10915 Drosophila grimshawi FBgn0118396 I 0.736
GL26026 Drosophila persimilis FBgn0163608 I 0.736
GM15894 Drosophila sechellia FBgn0170810 I 0.736
GJ11880 Drosophila virilis FBgn0199134 I 0.736
GE20814 Drosophila yakuba FBgn0238107 I 0.736
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.736
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.736
MESCA005881 Megaselia scalaris MESCA005881 I 0.736
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.736
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.736
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.736
GI13259 Drosophila mojavensis FBgn0136016 I 0.729
LotgiG159505 Lottia gigantea LotgiG159505 I 0.729
LCUP003485 Lucilia cuprina LCUP003485 I 0.729
MDOA002342 Musca domestica MDOA002342 I 0.729
AAEL006419 Aedes aegypti AAEL006419 I 0.721
CapteG179039 Capitella teleta CapteG179039 I 0.721
ISCW010197 Ixodes scapularis ISCW010197 I 0.721
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.721
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.721
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.713
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.713
NV17967 Nasonia vitripennis NV17967 I 0.713
AATE009298 Anopheles atroparvus AATE009298 I 0.713
AGAP008935 Anopheles gambiae AGAP008935 I 0.705
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.705
AALB007981 Anopheles albimanus AALB007981 I 0.705
ACOM040639 Anopheles coluzzii ACOM040639 I 0.705
ACUA014515 Anopheles culicifacies ACUA014515 I 0.705
ADIR011431 Anopheles dirus ADIR011431 I 0.705
AFAF012186 Anopheles farauti AFAF012186 I 0.705
AFUN007280 Anopheles funestus AFUN007280 I 0.705
AMEM004324 Anopheles merus AMEM004324 I 0.705
AMIN005880 Anopheles minimus AMIN005880 I 0.705