Gfo_R005402 (Geospiza fortis)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Gfo_R005402 T166304_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rbpjl
M09519_2.00 		Mus musculus
NDTTCCCABR
YVTGGGAAHN		 Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005402 CSL 26 163

Links

Other CSL family TFs
Other Geospiza fortis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003297 Calypte anna Aan_R003297 N 0.735
Afo_R002493 Aptenodytes forsteri Afo_R002493 I 0.985
Brh_R003150 Buceros rhinoceros Brh_R003150 N 0.750
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
Cmyd_10015219 Chelonia mydas Cmyd_10015219 I 0.955
RBPJL Anolis carolinensis ENSACAG00000012362 I 0.864
ENSAMXG00000008068 Astyanax mexicanus ENSAMXG00000008068 N 0.735
ENSAPLG00000008031 Anas platyrhynchos ENSAPLG00000008031 I 0.977
RBPJL Bos taurus ENSBTAG00000011283 I 0.735
RBPJL Canis familiaris ENSCAFG00000009670 I 0.735
ENSCHOG00000000749 Choloepus hoffmanni ENSCHOG00000000749 I 0.750
RBPJL Callithrix jacchus ENSCJAG00000017526 I 0.758
RBPJL Cavia porcellus ENSCPOG00000020407 I 0.742
ENSCSAG00000014350 Chlorocebus sabaeus ENSCSAG00000014350 I 0.765
rbpjl Danio rerio ENSDARG00000074148 N 0.742
RBPJL Dasypus novemcinctus ENSDNOG00000011919 I 0.742
RBPJL Equus caballus ENSECAG00000013463 I 0.735
RBPJL Erinaceus europaeus ENSEEUG00000013039 I 0.727
RBPJL Echinops telfairi ENSETEG00000005066 I 0.712
ENSFALG00000005428 Ficedula albicollis ENSFALG00000005428 I 0.992
RBPJL Homo sapiens ENSG00000124232 I 0.765
RBPJ Homo sapiens ENSG00000168214 D 1.000
RBPJL Gallus gallus ENSGALG00000003952 I 0.932
RBPJL Gorilla gorilla ENSGGOG00000004147 I 0.733
ENSLACG00000005754 Latimeria chalumnae ENSLACG00000005754 N 0.811
RBPJL Loxodonta africana ENSLAFG00000008148 I 0.735
ENSLOCG00000007645 Lepisosteus oculatus ENSLOCG00000007645 N 0.803
RBPJL Meleagris gallopavo ENSMGAG00000017264 I 0.932
RBPJL Microcebus murinus ENSMICG00000014225 I 0.742
RBPJL Myotis lucifugus ENSMLUG00000005893 I 0.750
RBPJL Macaca mulatta ENSMMUG00000003404 I 0.758
ENSMPUG00000017637 Mustela putorius furo ENSMPUG00000017637 I 0.742
Rbpjl Mus musculus ENSMUSG00000017007 D 0.742
ENSOARG00000005105 Ovis aries ENSOARG00000005105 I 0.742
RBPJL Oryctolagus cuniculus ENSOCUG00000009087 I 0.727
RBPJL Otolemur garnettii ENSOGAG00000024900 I 0.758
ENSP00000341243 Macaca fascicularis ENSP00000341243 I 0.758
ENSPANG00000024780 Papio anubis ENSPANG00000024780 I 0.789
ENSPSIG00000014017 Pelodiscus sinensis ENSPSIG00000014017 I 0.939
RBPJL Pan troglodytes ENSPTRG00000013542 I 0.765
RBPJL Pteropus vampyrus ENSPVAG00000008751 I 0.744
Rbpjl Rattus norvegicus ENSRNOG00000026295 I 0.705
ENSSTOG00000009296 Ictidomys tridecemlineatus ENSSTOG00000009296 I 0.742
RBPJL Taeniopygia guttata ENSTGUG00000005009 I 1.000
RBPJL Tursiops truncatus ENSTTRG00000013806 I 0.742
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
Myotis_brandtii_RBPJL_10002478 Myotis brandtii Myotis_brandtii_RBPJL_10002478 I 0.735
Ogr10601 Ophisaurus gracilis Ogr10601 I 0.856
Pvit_08747 Pogona vitticeps Pvit_08747 I 0.864