CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr10601
(
Ophisaurus gracilis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
Ogr10601
T166310_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rbpjl
M09519_2.00
Mus musculus
NDTTCCCABR
YVTGGGAAHN
Misc
Heinz et al.(2010)
Panc1-Rbpj1_GSE47459
0.727
0.727
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr10601
CSL
47
184
VLILHAKVAQKSYGNEKRFFCPPPCVYLTGPGWKQKKEEIKGKDLAESSSKVCGYIGLDSMGSSSVESQKLNFEEQPDSKEFSCAKALYISDADKRKHFQLVLKLFFSNGQEIGTFHSRLIKVISKPSQKKQSLKNTD
Links
Other
CSL
family TFs
Other
Ophisaurus gracilis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Homo sapiens
ENSG00000168214
D
1.000
RBPJL
Anolis carolinensis
ENSACAG00000012362
I
0.932
Pvit_08747
Pogona vitticeps
Pvit_08747
I
0.909
RBPJL
Taeniopygia guttata
ENSTGUG00000005009
I
0.856
Afo_R002493
Aptenodytes forsteri
Afo_R002493
I
0.856
Gfo_R005402
Geospiza fortis
Gfo_R005402
I
0.856
ENSAPLG00000008031
Anas platyrhynchos
ENSAPLG00000008031
I
0.848
ENSFALG00000005428
Ficedula albicollis
ENSFALG00000005428
I
0.848
Cmyd_10015219
Chelonia mydas
Cmyd_10015219
I
0.848
ENSPSIG00000014017
Pelodiscus sinensis
ENSPSIG00000014017
I
0.833
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.824
RBPJL
Gallus gallus
ENSGALG00000003952
I
0.818
RBPJL
Meleagris gallopavo
ENSMGAG00000017264
I
0.818
ENSPANG00000024780
Papio anubis
ENSPANG00000024780
I
0.807
ENSLOCG00000007645
Lepisosteus oculatus
ENSLOCG00000007645
N
0.788
ENSLACG00000005754
Latimeria chalumnae
ENSLACG00000005754
N
0.773
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.765
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.762
RBPJL
Pteropus vampyrus
ENSPVAG00000008751
I
0.744
ENSCSAG00000014350
Chlorocebus sabaeus
ENSCSAG00000014350
I
0.727
RBPJL
Dasypus novemcinctus
ENSDNOG00000011919
I
0.727
RBPJL
Homo sapiens
ENSG00000124232
I
0.727
RBPJL
Myotis lucifugus
ENSMLUG00000005893
I
0.727
Rbpjl
Mus musculus
ENSMUSG00000017007
D
0.727
RBPJL
Pan troglodytes
ENSPTRG00000013542
I
0.727
SMUV_0001013801
Syphacia muris
SMUV_0001013801
I
0.727
RBPJL
Canis familiaris
ENSCAFG00000009670
I
0.720
RBPJL
Callithrix jacchus
ENSCJAG00000017526
I
0.720
RBPJL
Cavia porcellus
ENSCPOG00000020407
I
0.720
RBPJL
Macaca mulatta
ENSMMUG00000003404
I
0.720
ENSOARG00000005105
Ovis aries
ENSOARG00000005105
I
0.720
RBPJL
Otolemur garnettii
ENSOGAG00000024900
I
0.720
ENSP00000341243
Macaca fascicularis
ENSP00000341243
I
0.720
NECAME_17145
Necator americanus
NECAME_17145
I
0.714
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
0.714
RBPJL
Bos taurus
ENSBTAG00000011283
I
0.712
ENSCHOG00000000749
Choloepus hoffmanni
ENSCHOG00000000749
I
0.712
RBPJL
Microcebus murinus
ENSMICG00000014225
I
0.712
ENSMPUG00000017637
Mustela putorius furo
ENSMPUG00000017637
I
0.712
ENSSTOG00000009296
Ictidomys tridecemlineatus
ENSSTOG00000009296
I
0.712
RBPJL
Tursiops truncatus
ENSTTRG00000013806
I
0.712
Myotis_brandtii_RBPJL_10002478
Myotis brandtii
Myotis_brandtii_RBPJL_10002478
I
0.712
RBPJL
Equus caballus
ENSECAG00000013463
I
0.705
RBPJL
Erinaceus europaeus
ENSEEUG00000013039
I
0.705
RBPJL
Loxodonta africana
ENSLAFG00000008148
I
0.705