CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01496
(
Litomosoides sigmodontis
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
nLs.2.1.2.g01496
T166455_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01496-RA
CSL
156
310
VSIFHAKVAQKSYGNEKRFFCPPPCIYLFGDGWKHKKKMAEDLYRRYREYKKRNDVQETDSDAEHISEARSTELCAFIGIGAPSEQEKQTLDFSSNKDYCAAKTLYISDADKRKYFELSVQFFYGSGHEIGVFSSQRIKVISKPSKKKQSMKNTD
Links
Other
CSL
family TFs
Other
Litomosoides sigmodontis
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025964
Oryza indica
BGIOSGA025964
N
0.000
BRADI1G24310
Brachypodium distachyon
BRADI1G24310
N
0.000
GRMZM2G106548
Zea mays
GRMZM2G106548
N
0.000
LPERR07G16410
Leersia perrieri
LPERR07G16410
N
0.000
MLOC_62589
Hordeum vulgare
MLOC_62589
N
0.000
OBART07G19080
Oryza barthii
OBART07G19080
N
0.000
OGLUM07G18870
Oryza glumaepatula
OGLUM07G18870
N
0.000
OMERI07G15800
Oryza meridionalis
OMERI07G15800
N
0.000
ONIVA07G17430
Oryza nivara
ONIVA07G17430
N
0.000
OPUNC07G17970
Oryza punctata
OPUNC07G17970
N
0.000
OPUNC07G18000
Oryza punctata
OPUNC07G18000
N
0.000
ORGLA07G0244600
Oryza glaberrima
ORGLA07G0244600
N
0.000
ORUFI07G19860
Oryza rufipogon
ORUFI07G19860
N
0.000
OS07G0567700
Oryza sativa
OS07G0567700
N
0.000
Pavir.Ba00637
Panicum virgatum
Pavir.Ba00637
N
0.000
Pavir.Bb03100
Panicum virgatum
Pavir.Bb03100
N
0.000
Si032551m.g
Setaria italica
Si032551m.g
N
0.000
Traes_2BS_015167E00
Triticum aestivum
Traes_2BS_015167E00
N
0.000