Pavir.Ba00637 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ba00637 T202971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00637.1.p GRAS 151 515

Links

Other GRAS family TFs
Other Panicum virgatum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.930
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.930
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.930
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.930
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.930
OS07G0567700 Oryza sativa OS07G0567700 N 0.930
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.927
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.927
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.927
OBART07G19080 Oryza barthii OBART07G19080 N 0.916
Si032551m.g Setaria italica Si032551m.g N 0.916
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.913
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.913
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.898
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.868
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.849
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.846
OLONG_002258 Oryza longistaminata OLONG_002258 N 0.844
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.753
Pm014866 Prunus mume Pm014866 N 0.753
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.753
MDP0000287321 Malus domestica MDP0000287321 N 0.751
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.748
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.748
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.745
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.745
PK21090.1 Cannabis sativa PK21090.1 N 0.745
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.740
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.740
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.740
29872.m000537 Ricinus communis 29872.m000537 N 0.737
MDP0000269044 Malus domestica MDP0000269044 N 0.737
MDP0000289554 Malus domestica MDP0000289554 N 0.737
TCM_002021 Theobroma cacao TCM_002021 N 0.735
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.728
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.728
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.720
Ca_11130 Cicer arietinum Ca_11130 N 0.720
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.717
Cla005525 Citrullus lanatus Cla005525 N 0.715
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.709
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.706
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.703
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.700
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.700