cassava29451.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava29451.valid.m1 T202076_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29451.valid.m1 GRAS 77 439

Links

Other GRAS family TFs
Other Manihot esculenta TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29872.m000537 Ricinus communis 29872.m000537 N 0.939
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.931
TCM_002021 Theobroma cacao TCM_002021 N 0.925
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.917
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.914
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.912
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.909
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.906
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.901
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.898
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.889
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.887
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.887
Ca_11130 Cicer arietinum Ca_11130 N 0.887
Pm014866 Prunus mume Pm014866 N 0.884
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.881
MDP0000287321 Malus domestica MDP0000287321 N 0.881
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.878
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.878
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.875
MDP0000269044 Malus domestica MDP0000269044 N 0.870
MDP0000289554 Malus domestica MDP0000289554 N 0.870
PK21090.1 Cannabis sativa PK21090.1 N 0.870
Cla005525 Citrullus lanatus Cla005525 N 0.865
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.862
MTR_4g076020 Medicago truncatula MTR_4g076020 N 0.851
Traes_2AS_455BD2CA1 Triticum aestivum Traes_2AS_455BD2CA1 N 0.848
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.845
OS07G0567700 Oryza sativa OS07G0567700 N 0.844
OB07G24850 Oryza brachyantha OB07G24850 N 0.844
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N 0.812
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.806
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N 0.801
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.757
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.757
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.757
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.757
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.757
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.757
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.757
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.754
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.749
OBART07G19080 Oryza barthii OBART07G19080 N 0.748
Sb02g036680 Sorghum bicolor Sb02g036680 N 0.741
SCL23 Arabidopsis thaliana AT5G41920 N 0.741
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.740
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.732
Si032551m.g Setaria italica Si032551m.g N 0.732
Bra025456 Brassica rapa Bra025456 N 0.731
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.730
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.728
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.728
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.727
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.727
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.725
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.724
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.721
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.720
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.719
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.710
Bo4g143710 Brassica oleracea Bo4g143710 N 0.707