SCL23 (Arabidopsis thaliana)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 AT5G41920 T199842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G41920.1 GRAS 40 400

Links

Other GRAS family TFs
Other Arabidopsis thaliana TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.961
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.950
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.947
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.925
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.914
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.900
Bra025456 Brassica rapa Bra025456 N 0.853
Bo4g143710 Brassica oleracea Bo4g143710 N 0.851
Traes_2AS_455BD2CA1 Triticum aestivum Traes_2AS_455BD2CA1 N 0.788
OB07G24850 Oryza brachyantha OB07G24850 N 0.781
OS07G0567700 Oryza sativa OS07G0567700 N 0.781
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.750
Bostr.7200s0031 Boechera stricta Bostr.7200s0031 N 0.744
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.741
scaffold_21300003.1 Arabidopsis lyrata scaffold_21300003.1 N 0.739
TCM_002021 Theobroma cacao TCM_002021 N 0.732
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.731
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.729
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.729
scaffold_503520.1 Arabidopsis lyrata scaffold_503520.1 N 0.727
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.727
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.727
Pm014866 Prunus mume Pm014866 N 0.724
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.724
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.724
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.724
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.724
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.721
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.721
29872.m000537 Ricinus communis 29872.m000537 N 0.721
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.721
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.718
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.718
Ca_11130 Cicer arietinum Ca_11130 N 0.716
Cla005525 Citrullus lanatus Cla005525 N 0.715
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.713
MDP0000287321 Malus domestica MDP0000287321 N 0.710
PK21090.1 Cannabis sativa PK21090.1 N 0.704