Cla005525 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla005525 T201912_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla005525 GRAS 79 440

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.964
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.865
TCM_002021 Theobroma cacao TCM_002021 N 0.865
Pm014866 Prunus mume Pm014866 N 0.862
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.862
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.859
MDP0000287321 Malus domestica MDP0000287321 N 0.856
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.856
PK21090.1 Cannabis sativa PK21090.1 N 0.856
29872.m000537 Ricinus communis 29872.m000537 N 0.848
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.848
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.845
Ca_11130 Cicer arietinum Ca_11130 N 0.843
MDP0000289554 Malus domestica MDP0000289554 N 0.840
MDP0000269044 Malus domestica MDP0000269044 N 0.840
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.839
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.837
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.837
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.837
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.837
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.834
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.826
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.823
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.812
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.804
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.801
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N 0.782
MTR_4g076020 Medicago truncatula MTR_4g076020 N 0.779
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.762
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N 0.751
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.746
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.746
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.746
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.746
OS07G0567700 Oryza sativa OS07G0567700 N 0.746
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.746
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.746
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.746
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.746
OBART07G19080 Oryza barthii OBART07G19080 N 0.738
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.729
Si032551m.g Setaria italica Si032551m.g N 0.724
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.718
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.715
SCL23 Arabidopsis thaliana AT5G41920 N 0.715
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.713
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.713
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.708
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.707
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.707
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.704
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.704
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.702