CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g076020
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_4g076020
T200548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES89488
GRAS
81
429
LLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLNQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGFVPHPRFTVEEDPFESTGRRLADFASSLGLPFEFHPVEGKIGSVTEPGQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRAGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQ
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_11130
Cicer arietinum
Ca_11130
N
0.940
chr3.CM0460.360.nd
Lotus japonicus
chr3.CM0460.360.nd
N
0.917
GLYMA11G10220
Glycine max
GLYMA11G10220
N
0.884
POPTR_0016s02030
Populus trichocarpa
POPTR_0016s02030
N
0.862
GLYMA12G02530
Glycine max
GLYMA12G02530
N
0.854
cassava29451.valid.m1
Manihot esculenta
cassava29451.valid.m1
N
0.851
SapurV1A.0295s0450
Salix purpurea
SapurV1A.0295s0450
N
0.848
Pm014866
Prunus mume
Pm014866
N
0.840
Ciclev10011732m.g
Citrus clementina
Ciclev10011732m.g
N
0.834
MDP0000269044
Malus domestica
MDP0000269044
N
0.822
MDP0000289554
Malus domestica
MDP0000289554
N
0.822
29872.m000537
Ricinus communis
29872.m000537
N
0.820
orange1.1g013903m.g
Citrus sinensis
orange1.1g013903m.g
N
0.819
POPTR_0006s02220
Populus trichocarpa
POPTR_0006s02220
N
0.818
evm.TU.supercontig_8.295
Carica papaya
evm.TU.supercontig_8.295
N
0.814
PRUPE_ppa005742mg
Prunus persica
PRUPE_ppa005742mg
N
0.812
TCM_002021
Theobroma cacao
TCM_002021
N
0.809
VIT_03s0017g01660
Vitis vinifera
VIT_03s0017g01660
N
0.807
SapurV1A.0154s0180
Salix purpurea
SapurV1A.0154s0180
N
0.805
gene24339-v1.0-hybrid
Fragaria vesca
gene24339-v1.0-hybrid
N
0.801
Eucgr.A00903
Eucalyptus grandis
Eucgr.A00903
N
0.798
PK21090.1
Cannabis sativa
PK21090.1
N
0.798
MDP0000287321
Malus domestica
MDP0000287321
N
0.793
Cucsa.180010
Cucumis sativus
Cucsa.180010
N
0.790
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.781
OB07G24850
Oryza brachyantha
OB07G24850
N
0.781
OS07G0567700
Oryza sativa
OS07G0567700
N
0.781
Cla005525
Citrullus lanatus
Cla005525
N
0.779
Gorai.004G063200
Gossypium raimondii
Gorai.004G063200
N
0.771
Solyc07g043330.1
Solanum lycopersicum
Solyc07g043330.1
N
0.754
BGIOSGA025964
Oryza indica
BGIOSGA025964
N
0.728
OGLUM07G18870
Oryza glumaepatula
OGLUM07G18870
N
0.728
ONIVA07G17430
Oryza nivara
ONIVA07G17430
N
0.728
ORGLA07G0244600
Oryza glaberrima
ORGLA07G0244600
N
0.728
ORUFI07G19860
Oryza rufipogon
ORUFI07G19860
N
0.728
PGSC0003DMG400011742
Solanum tuberosum
PGSC0003DMG400011742
N
0.717
OBART07G19080
Oryza barthii
OBART07G19080
N
0.716
Aquca_030_00364
Aquilegia coerulea
Aquca_030_00364
N
0.713
GRMZM2G131516
Zea mays
GRMZM2G131516
N
0.712
Si032551m.g
Setaria italica
Si032551m.g
N
0.705
OPUNC07G17970
Oryza punctata
OPUNC07G17970
N
0.704
OPUNC07G18000
Oryza punctata
OPUNC07G18000
N
0.704
MLOC_62589
Hordeum vulgare
MLOC_62589
N
0.702