CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g143710
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g143710
T199931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g143710.1
GRAS
45
404
LLSLLLQCAEYVATDHLREASILLSEISETCSPFGSSPERVVAYFAQALQARVISTYLSGACSCSQLSESPIPSQKIFAALQTFNSLSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPGLFHILASRPRKLRSIRITGFGPSSDVLASTGRRLADFAASLSLPFEFRPIVGKIGNVTDPSRLGRRPGEAVVVHWMQHRLYDVTGNGIDALEIVRRLRPNLITMVEQELSYDDGGGGCFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLATEIRNIVGGKRRGVMRWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWQ
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10027784m.g
Eutrema salsugineum
Thhalv10027784m.g
N
0.879
SCL23
Arabidopsis thaliana
AT5G41920
N
0.851
Cagra.6263s0002
Capsella grandiflora
Cagra.6263s0002
N
0.848
fgenesh2_kg.7__3225__AT5G41920.1
Arabidopsis lyrata
fgenesh2_kg.7__3225__AT5G41920.1
N
0.838
Bostr.17016s0016
Boechera stricta
Bostr.17016s0016
N
0.836
Carubv10004949m.g
Capsella rubella
Carubv10004949m.g
N
0.836
Bostr.25375s0003
Boechera stricta
Bostr.25375s0003
N
0.822
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.750
cassava29451.valid.m1
Manihot esculenta
cassava29451.valid.m1
N
0.707
Ciclev10011732m.g
Citrus clementina
Ciclev10011732m.g
N
0.707
Eucgr.A00903
Eucalyptus grandis
Eucgr.A00903
N
0.707
POPTR_0006s02220
Populus trichocarpa
POPTR_0006s02220
N
0.704
PRUPE_ppa005742mg
Prunus persica
PRUPE_ppa005742mg
N
0.701
VIT_03s0017g01660
Vitis vinifera
VIT_03s0017g01660
N
0.701
Pm014866
Prunus mume
Pm014866
N
0.701
Cucsa.180010
Cucumis sativus
Cucsa.180010
N
0.701
chr3.CM0460.360.nd
Lotus japonicus
chr3.CM0460.360.nd
N
0.701