CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000002317
(
Pelodiscus sinensis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSPSIG00000002317
T168259_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.979
0.979
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.809
0.809
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.787
0.787
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000002338
CxxC
20
66
GARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Pelodiscus sinensis
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000008501
Angiostrongylus cantonensis
ACAC_0000008501
N
0.000
ACOC_0000493901
Angiostrongylus costaricensis
ACOC_0000493901
N
0.000
ALUE_0000347301
Ascaris lumbricoides
ALUE_0000347301
N
0.000
ANCCAN_14716
Ancylostoma caninum
ANCCAN_14716
N
0.000
ANCCEY_13935
Ancylostoma ceylanicum
ANCCEY_13935
N
0.000
ASIM_0001085501
Anisakis simplex
ASIM_0001085501
N
0.000
ASU_10686
Ascaris suum
ASU_10686
N
0.000
Bm6679
Brugia malayi
Bm6679
N
0.000
BXY_1053400
Bursaphelenchus xylophilus
BXY_1053400
N
0.000
CBG08484
Caenorhabditis briggsae
CBG08484
N
0.000
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.000
CJA15586
Caenorhabditis japonica
CJA15586
N
0.000
CRE28107
Caenorhabditis remanei
CRE28107
N
0.000
DICVIV_02142
Dictyocaulus viviparus
DICVIV_02142
N
0.000
DME_0000295201
Dracunculus medinensis
DME_0000295201
N
0.000
EEL_0000257001
Elaeophora elaphi
EEL_0000257001
N
0.000
GPUH_0000076201
Gongylonema pulchrum
GPUH_0000076201
N
0.000
LOAG_15534
Loa loa
LOAG_15534
N
0.000
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.000
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.000
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.000
nDi.2.2.2.g12190
Dirofilaria immitis
nDi.2.2.2.g12190
N
0.000
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.000
NECAME_01451
Necator americanus
NECAME_01451
N
0.000
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.000
nOo.2.0.1.g10305
Onchocerca ochengi
nOo.2.0.1.g10305
N
0.000
nOo.2.0.1.g10313
Onchocerca ochengi
nOo.2.0.1.g10313
N
0.000
nOo.2.0.1.g11935
Onchocerca ochengi
nOo.2.0.1.g11935
N
0.000
PEQ_0000501101
Parascaris equorum
PEQ_0000501101
N
0.000
PTRK_0001384100
Parastrongyloides trichosuri
PTRK_0001384100
N
0.000
RSKR_0000378600
Rhabditophanes kr3021
RSKR_0000378600
N
0.000
SMUV_0000990001
Syphacia muris
SMUV_0000990001
N
0.000
SPAL_0001441800
Strongyloides papillosus
SPAL_0001441800
N
0.000
SSTP_0000594700
Strongyloides stercoralis
SSTP_0000594700
N
0.000
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.000
TELCIR_08176
Teladorsagia circumcincta
TELCIR_08176
N
0.000
grh-1
Caenorhabditis elegans
WBGene00001707
N
0.000
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.000