CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000009902
(
Lepisosteus oculatus
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSLOCG00000009902
T172692_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.956
0.956
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.956
0.956
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.765
0.765
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000012105
E2F
107
189
NGKGLRHFSMKVCEKVQRKGTTTYNEVADELVAEFSNTDSHISPSDSHVYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIG
Links
Other
E2F
family TFs
Other
Lepisosteus oculatus
TFs
541 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac103
Arabidopsis thaliana
AT5G64060
D
0.000
Bo2g009300
Brassica oleracea
Bo2g009300
I
0.000
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.000
Bostr.0568s0398
Boechera stricta
Bostr.0568s0398
I
0.000
Bra024263
Brassica rapa
Bra024263
I
0.000
Bra028640
Brassica rapa
Bra028640
I
0.000
Cagra.0248s0087
Capsella grandiflora
Cagra.0248s0087
I
0.000
Carubv10026643m.g
Capsella rubella
Carubv10026643m.g
I
0.000
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.000
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.000
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.000
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.000