Thhalv10004501m.g (Eutrema salsugineum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Thhalv10004501m.g T299208_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.929 0.798
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.929 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004501m NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Eutrema salsugineum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g101690 Brassica oleracea Bo3g101690 I 0.969
Bra024263 Brassica rapa Bra024263 I 0.969
Bostr.0568s0398 Boechera stricta Bostr.0568s0398 I 0.946
Cagra.0248s0087 Capsella grandiflora Cagra.0248s0087 I 0.935
Carubv10026643m.g Capsella rubella Carubv10026643m.g I 0.935
anac103 Arabidopsis thaliana AT5G64060 D 0.929
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.925
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.920
30136.m001048 Ricinus communis 30136.m001048 N 0.916
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.916
Ciclev10001200m.g Citrus clementina Ciclev10001200m.g N 0.916
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.913
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.912
NAC082 Arabidopsis thaliana AT5G09330 N 0.909
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.908
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.908
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.907
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.907
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.907
Bra028640 Brassica rapa Bra028640 I 0.904
gene27615-v1.0-hybrid Fragaria vesca gene27615-v1.0-hybrid N 0.899
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.894
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.894
Bo3g005150 Brassica oleracea Bo3g005150 N 0.893
Bo2g009300 Brassica oleracea Bo2g009300 I 0.891
Bra009379 Brassica rapa Bra009379 N 0.891
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.890
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.890
PK02804.1 Cannabis sativa PK02804.1 N 0.888
POPTR_0005s06040 Populus trichocarpa POPTR_0005s06040 N 0.886
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.886
GSMUA_Achr10G04530_001 Musa acuminata GSMUA_Achr10G04530_001 N 0.886
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.881
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.878
evm.TU.supercontig_42.145 Carica papaya evm.TU.supercontig_42.145 I 0.877
GSMUA_Achr7G23330_001 Musa acuminata GSMUA_Achr7G23330_001 N 0.877
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.873
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.872
mgf025137m Mimulus guttatus mgf025137m N 0.871