CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.13129s0062
(
Boechera stricta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Bostr.13129s0062
T297248_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13129s0062.1.p
NAC/NAM
7
133
APGFRFHPTDVELVRYYLKRKILGNKLLVDAIAEVDIYKFEPPDLPDMSYIKSGDLKWHFFCPREKKYASGLRANRATECGYWKTTGKERPVLCNSEVVGKIKTLVYHFGKSPNGVRTDWVIHEYRL
Links
Other
NAC/NAM
family TFs
Other
Boechera stricta
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.968
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.968
NAC082
Arabidopsis thaliana
AT5G09330
N
0.964
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.962
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.958
Bo3g005150
Brassica oleracea
Bo3g005150
N
0.935
Bra009379
Brassica rapa
Bra009379
N
0.933
Bo2g009300
Brassica oleracea
Bo2g009300
I
0.920
Bo9g174090
Brassica oleracea
Bo9g174090
N
0.917
Bra028640
Brassica rapa
Bra028640
I
0.913
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.905
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.888
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
0.888
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.880
30136.m001048
Ricinus communis
30136.m001048
N
0.880
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.878
Bra006019
Brassica rapa
Bra006019
N
0.874
mgf025137m
Mimulus guttatus
mgf025137m
N
0.874