CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g005920.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc11g005920.1
T295896_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g005920.1.1
NAC/NAM
5
131
PPGFRFHPTDVELIMYYLKRKITGKKLHFEGITELNIYKFSPWDLPDKCCYKSKDLEWYFFCPRERKYASGARMNRATDTGYWKTTGKDRPVTYCEKIVGSVKTLVFHLGHPPRGKRTDWVIHEYKF
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400028662
Solanum tuberosum
PGSC0003DMG400028662
N
0.938
mgf025137m
Mimulus guttatus
mgf025137m
N
0.931
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.927
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
0.927
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.926
PDK_20s1369501g001
Phoenix dactylifera
PDK_20s1369501g001
N
0.916
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.908
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.908
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.908
30136.m001048
Ricinus communis
30136.m001048
N
0.906
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
0.903
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.896
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.896
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
0.890
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.886
Lus10020896.g
Linum usitatissimum
Lus10020896.g
N
0.884
NAC082
Arabidopsis thaliana
AT5G09330
N
0.881
evm.TU.supercontig_42.145
Carica papaya
evm.TU.supercontig_42.145
I
0.881
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.880
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.880
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.880
Si022216m.g
Setaria italica
Si022216m.g
N
0.879
Pavir.Ga00269
Panicum virgatum
Pavir.Ga00269
N
0.879
Pavir.J14942
Panicum virgatum
Pavir.J14942
N
0.879
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.876
GRMZM2G176677
Zea mays
GRMZM2G176677
N
0.874
Sb06g034210
Sorghum bicolor
Sb06g034210
N
0.874
Solyc03g078120.2
Solanum lycopersicum
Solyc03g078120.2
N
0.872