CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo9g174090
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo9g174090
T292501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g174090.1
NAC/NAM
7
133
APGFRFHPTDVELVRYYLKRKVLGKKLLVDAIADLDIYKFEPSDLPDKSYIKSGDLKWHFFCPREKKYATGVRANRATECGYWKTTGKERAVLCNGEVVGKIKTLVYHVGKSPRGERTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g005150
Brassica oleracea
Bo3g005150
N
0.956
Bra009379
Brassica rapa
Bra009379
N
0.955
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.931
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.931
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.931
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.925
NAC082
Arabidopsis thaliana
AT5G09330
N
0.921
Bo2g009300
Brassica oleracea
Bo2g009300
I
0.918
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.917
Bra006019
Brassica rapa
Bra006019
N
0.905
Bra028640
Brassica rapa
Bra028640
I
0.905
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.879
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.879
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.879