CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g200125
(
Nematostella vectensis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
NEMVEDRAFT_v1g200125
T173289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND
HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.450
0.450
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH
DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.450
0.450
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN
NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.450
0.450
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD
HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.450
0.450
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN
NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.450
0.450
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT
AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.450
0.450
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW
WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.450
0.450
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN
NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.450
0.450
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.450
0.450
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.450
0.450
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS
SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.450
0.450
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.450
0.450
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN
NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.433
0.433
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.433
0.433
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN
NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.433
0.433
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.433
0.433
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.433
0.433
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.433
0.433
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.433
0.433
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.433
0.433
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.433
0.433
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.433
0.433
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.433
0.433
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA
TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.433
0.433
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.433
0.433
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.433
0.433
E2F1
M10446_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.433
0.433
E2F1
M10447_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.433
0.433
E2F1
M10448_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.433
0.433
E2F1
M10449_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.433
0.433
E2F1
M10450_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.433
0.433
E2F1
M10451_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.433
0.433
E2F1
M10452_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.433
0.433
E2F1
M10453_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.433
0.433
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO46727
E2F
19
79
SEASLGLISSKFLALLKDSECGVEINEAASKLGVKRRRVYDVVNILRGAGLIRPKRQTQPF
Links
Other
E2F
family TFs
Other
Nematostella vectensis
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy