CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NV12488
(
Nasonia vitripennis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
NV12488
T173298_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.897
0.897
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.897
0.897
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.794
0.794
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NV12488-PA
E2F
180
261
VGKGLRHFSMKVCEKVKKKGTTSYNEVADELVGEFTNPTHANSLTDQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLG
Links
Other
E2F
family TFs
Other
Nasonia vitripennis
TFs
575 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA023402
Oryza indica
BGIOSGA023402
N
0.000
cassava40681.m1
Manihot esculenta
cassava40681.m1
N
0.000
chr3.CM0452.130.nd
Lotus japonicus
chr3.CM0452.130.nd
N
0.000
evm.TU.supercontig_99.39
Carica papaya
evm.TU.supercontig_99.39
N
0.000
MDP0000803527
Malus domestica
MDP0000803527
N
0.000
OB06G31060
Oryza brachyantha
OB06G31060
N
0.000
OBART06G23380
Oryza barthii
OBART06G23380
N
0.000
OLONG_002212
Oryza longistaminata
OLONG_002212
N
0.000
OMERI06G23370
Oryza meridionalis
OMERI06G23370
N
0.000
BBM
Vitis vinifera
VIT_04s0023g00950
N
0.000