cassava40681.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava40681.m1 T006922_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40681.m1 AP2 43 97

Links

Other AP2 family TFs
Other Manihot esculenta TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra023921 Brassica rapa Bra023921 N 0.787
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.713
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.711
MDP0000803527 Malus domestica MDP0000803527 N 0.711
PK18855.1 Cannabis sativa PK18855.1 N 0.708
mgf017600m Mimulus guttatus mgf017600m N 0.706
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.697
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.695
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.688
BBM Vitis vinifera VIT_04s0023g00950 N 0.686
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.686
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.684
OB06G31060 Oryza brachyantha OB06G31060 N 0.684
OBART06G23380 Oryza barthii OBART06G23380 N 0.684
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.684
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.684
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.682
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.681
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.681
F775_10869 Aegilops tauschii F775_10869 N 0.681
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.681
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.681
OB05G22940 Oryza brachyantha OB05G22940 N 0.681
OBART05G15060 Oryza barthii OBART05G15060 N 0.681
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.681
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.681
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.681
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.681
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.681
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.681
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.681
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.681
Bo3g035770 Brassica oleracea Bo3g035770 N 0.679
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.679
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.679
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.679
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.679
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.679
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.679
Si021952m.g Setaria italica Si021952m.g N 0.679
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.679
30006.m000282 Ricinus communis 30006.m000282 N 0.679
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.679
mgf019897m Mimulus guttatus mgf019897m N 0.679
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.679
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.679
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.679
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.679
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.679
MDP0000314518 Malus domestica MDP0000314518 N 0.679
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.679
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.679
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.677
Bo4g013420 Brassica oleracea Bo4g013420 N 0.677
Bra004641 Brassica rapa Bra004641 N 0.677
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.677
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.677
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.677
TCM_024554 Theobroma cacao TCM_024554 N 0.677
Ca_07237 Cicer arietinum Ca_07237 N 0.677
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.677
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.677
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.677
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.677
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.677
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.677
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.677
PK12273.1 Cannabis sativa PK12273.1 N 0.677