CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra023921
(
Brassica rapa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bra023921
T001157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra023921.1-P
AP2
175
229
SIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGTEEEAAEAYDIAAIKFRGL
Links
Other
AP2
family TFs
Other
Brassica rapa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava40681.m1
Manihot esculenta
cassava40681.m1
N
0.787
BBM
Vitis vinifera
VIT_04s0023g00950
N
0.760
evm.TU.supercontig_99.39
Carica papaya
evm.TU.supercontig_99.39
N
0.760
BGIOSGA023402
Oryza indica
BGIOSGA023402
N
0.757
OB06G31060
Oryza brachyantha
OB06G31060
N
0.757
OBART06G23380
Oryza barthii
OBART06G23380
N
0.757
OLONG_002212
Oryza longistaminata
OLONG_002212
N
0.757
OMERI06G23370
Oryza meridionalis
OMERI06G23370
N
0.757
MDP0000803527
Malus domestica
MDP0000803527
N
0.684
chr3.CM0452.130.nd
Lotus japonicus
chr3.CM0452.130.nd
N
0.679