CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf09661-processed-gene-0.0
(
Meloidogyne floridensis
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
augustus_masked-nMf.1.1.scaf09661-processed-gene-0.0
T174909_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf09661-processed-gene-0.0-mRNA-1
EBF1
27
105
NNCTLLDAVVFNCIRTEQDFYVRLVDSQTKQAIAYEGQDKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVMLSM
augustus_masked-nMf.1.1.scaf09661-processed-gene-0.0-mRNA-1
EBF1
101
135
VMLSMTPRVDTDVLAVSDNMFVHNNSKHGRRVKRG
Links
Other
EBF1
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
14438_YLR013W
Saccharomyces mikatae
14438_YLR013W
I
14781_YLR013W
Saccharomyces paradoxus
14781_YLR013W
I
NCAS_0C04570
Naumovozyma castellii
NCAS_0C04570
I
SKUD_202512
Saccharomyces kudriavzevii
SKUD_202512
I
GAT3
Saccharomyces cerevisiae
YLR013W
D