CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCAS_0C04570
(
Naumovozyma castellii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
NCAS_0C04570
T194268_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAT3
M00053_2.00
Saccharomyces cerevisiae
NDAGWTYNNN
NNNRAWCTHN
PBM
Badis et al.(2008)
GAT3_2122
0.805
0.528
GAT3
M01549_2.00
Saccharomyces cerevisiae
NDAGWTYNNN
NNNRAWCTHN
PBM
Zhu et al.(2009)
Gat3
0.805
0.528
GAT3
M07482_2.00
Saccharomyces cerevisiae
RGATCYVNN
NNBRGATCY
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0301.1
0.805
0.528
GAT3
M08565_2.00
Saccharomyces cerevisiae
RGATCYVNN
NNBRGATCY
Misc
DeBoer et al.(2011)
YLR013W_542
0.805
0.528
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC69447
GATA
85
120
CRQCSSSEIGQWRRGPYGPHTLCNKCGLFYSKVTKR
Links
Other
GATA
family TFs
Other
Naumovozyma castellii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
15667_YLR013W
Saccharomyces bayanus
15667_YLR013W
I
0.831
SKUD_202512
Saccharomyces kudriavzevii
SKUD_202512
I
0.805
GAT3
Saccharomyces cerevisiae
YLR013W
D
0.805
14438_YLR013W
Saccharomyces mikatae
14438_YLR013W
I
0.805
14781_YLR013W
Saccharomyces paradoxus
14781_YLR013W
I
0.805