Alligator_sinensis_CCG017634.1 (Alligator sinensis)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 Alligator_sinensis_CCG017634.1 T177686_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Spi1
M00155_2.00
Mus musculus
NNNVGGAAVH

DBTTCCBNNN
PBM
Badis et al.(2009)
Sfpi1_1034
0.995 0.963
Spi1
M01475_2.00
Mus musculus
DDNVGGAASY

RSTTCCBNHH
PBM
Wei et al.(2010)
Sfpi1
0.995 0.963
SPI1
M02965_2.00
Homo sapiens
RAAAAGMGGAAGTW

WACTTCCKCTTTTY
SELEX
Jolma et al.(2013)
SPI1_1
0.995 0.963
SPI1
M07944_2.00
Homo sapiens
NRAAWGRGGAASTGRRANN

NNTYYCASTTCCYCWTTYN
ChIP-seq
Gerstein et al.(2012)
GM12878_PU1_HudsonAlpha
0.995 0.963
SPI1
M07945_2.00
Homo sapiens
AAWGRGGAASTGARAVHNN

NNDBTYTCASTTCCYCWTT
ChIP-seq
Gerstein et al.(2012)
GM12891_PU1_HudsonAlpha
0.995 0.963
SPI1
M07946_2.00
Homo sapiens
RRAAAGAGGAAGTGV

BCACTTCCTCTTTYY
ChIP-seq
Gerstein et al.(2012)
K562_PU1_HudsonAlpha
0.995 0.963
SPI1
M08026_2.00
Homo sapiens
VRAAWGRGGAAGTGV

BCACTTCCYCWTTYB
ChIP-seq
Chen et al.(2011)
SRP005406_SPI1
0.995 0.963
Spi1
M08027_2.00
Mus musculus
VRRAWRRGGAAGWVD

HBWCTTCCYYWTYYB
ChIP-seq
Chen et al.(2011)
GSE11329_Sfpi1
0.995 0.963
SPI1
M09047_2.00
Homo sapiens
VRAAWGRGGAAGTGRNN

NNYCACTTCCYCWTTYB
Misc
Kulakovskiy et al.(2013)
SPI1_HUMAN.H11MO.0.A
0.995 0.963
Spi1
M09065_2.00
Mus musculus
VRARWGRGGAAGTGV

BCACTTCCYCWYTYB
Misc
Kulakovskiy et al.(2013)
SPI1_MOUSE.H11MO.0.A
0.995 0.963
Spi1
M09538_2.00
Mus musculus
WGAGGAAGTG

CACTTCCTCW
Misc
Heinz et al.(2010)
ThioMac-PU.1_GSE21512
0.995 0.963
SPI1
M10472_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PU1_Q4
0.995 0.963
SPI1
M10473_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PU1_Q6
0.995 0.963
SPI1
M10474_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_01
0.995 0.963
SPI1
M10475_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_07
0.995 0.963
SPI1
M10476_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_08
0.995 0.963
SPI1
M10477_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_Q5
0.995 0.963
SPIC
M03005_2.00
Homo sapiens
NRAAWSVGGAAGTM

KACTTCCBSWTTYN
SELEX
Jolma et al.(2013)
SPIC_1
0.979 0.637
Spic
M01480_2.00
Mus musculus
NNNNRGAAV

BTTCYNNNN
PBM
Wei et al.(2010)
Spic
0.972 0.625
Spic
M03009_2.00
Mus musculus
RAAAAGMGGAAGTW

WACTTCCKCTTTTY
SELEX
Jolma et al.(2013)
Spic_1
0.972 0.625
SPIB
M03008_2.00
Homo sapiens
NAAAAGMGGAAGTD

HACTTCCKCTTTTN
SELEX
Jolma et al.(2013)
SPIB_1
0.960 0.738
SPIB
M04803_2.00
Homo sapiens
DWDGVGGAAGTD

HACTTCCBCHWH
SELEX
Yin et al.(2017)
SPIB_eDBD_HT-SELEX
0.960 0.738
SPIB
M04805_2.00
Homo sapiens
NWWWRVGGAASTN

NASTTCCBYWWWN
SELEX
Yin et al.(2017)
SPIB_FL_HT-SELEX
0.960 0.738
SPIB
M02678_2.00
Homo sapiens
WSMGGAA

TTCCKSW
SELEX
Mathelier et al.(2014)
MA0081.1
0.960 0.738
SPIB
M09064_2.00
Homo sapiens
NRAAWGRGGAAGTGRRD

HYYCACTTCCYCWTTYN
Misc
Kulakovskiy et al.(2013)
SPIB_HUMAN.H11MO.0.A
0.960 0.738
Spib
M09068_2.00
Mus musculus
RAAAGRGGAAGTGRVWN

NWBYCACTTCCYCTTTY
Misc
Kulakovskiy et al.(2013)
SPIB_MOUSE.H11MO.0.A
0.960 0.738
SPIB
M09537_2.00
Homo sapiens
AAARVGGAASTG

CASTTCCBYTTT
Misc
Heinz et al.(2010)
OCILY3-SPIB_GSE56857
0.960 0.738
SPIB
M10519_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPIB_01
0.960 0.738
SPIB
M04804_2.00
Homo sapiens
DAWGRGGAAGTD

HACTTCCYCWTH
SELEX
Yin et al.(2017)
SPIB_eDBD_Methyl-HT-SELEX
0.960 0.738
SPIB
M04806_2.00
Homo sapiens
RWWWGRGGAAGTD

HACTTCCYCWWWY
SELEX
Yin et al.(2017)
SPIB_FL_Methyl-HT-SELEX
0.960 0.738
Elf5
M01490_2.00
Mus musculus
DNVVGGAARH

DYTTCCBBNH
PBM
Wei et al.(2010)
Elf5
0.727 0.425
ELF5
M02988_2.00
Homo sapiens
WNVMGGAAGTN

NACTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_1
0.727 0.425
ELF5
M02989_2.00
Homo sapiens
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_2
0.727 0.425
Elf5
M03011_2.00
Mus musculus
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
Elf5_1
0.727 0.425
ELF5
M04756_2.00
Homo sapiens
NDNVMGGAAGBD

HVCTTCCKBNHN
SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX
0.727 0.425
ELF5
M04758_2.00
Homo sapiens
NAMCCGGAAGYN

NRCTTCCGGKTN
SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX
0.727 0.425
ELF5
M09054_2.00
Homo sapiens
VVVANVMGGAAGHDV

BHDCTTCCKBNTBBB
Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A
0.727 0.425
Elf5
M09076_2.00
Mus musculus
RGRAVRAGGAAGDRRNN

NNYYHCTTCCTYBTYCY
Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A
0.727 0.425
ELF5
M09534_2.00
Homo sapiens
ABVMGGAAGT

ACTTCCKBVT
Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407
0.727 0.425
ELF5
M10501_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF5_01
0.727 0.425
ELF5
M04757_2.00
Homo sapiens
NABVAGGAAGTD

HACTTCCTBVTN
SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX
0.727 0.425
ELF5
M04759_2.00
Homo sapiens
DABVAGGAAGTD

HACTTCCTBVTH
SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX
0.727 0.425
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG017634.1 Ets 149 231

Links

Other Ets family TFs
Other Alligator sinensis TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000844001 Angiostrongylus costaricensis ACOC_0000844001 I
ALUE_0000650501 Ascaris lumbricoides ALUE_0000650501 I
ANCCAN_07957 Ancylostoma caninum ANCCAN_07957 I
ANCCEY_15520 Ancylostoma ceylanicum ANCCEY_15520 I
ANCDUO_00071 Ancylostoma duodenale ANCDUO_00071 I
ASIM_0001003201 Anisakis simplex ASIM_0001003201 I
ASU_03710 Ascaris suum ASU_03710 I
Bm6776 Brugia malayi Bm6776 I
DICVIV_12815 Dictyocaulus viviparus DICVIV_12815 I
GPUH_0002134401 Gongylonema pulchrum GPUH_0002134401 I
Hba_19892 Heterorhabditis bacteriophora Hba_19892 I
HCOI00898900 Haemonchus contortus HCOI00898900 I
HPBE_0000764601 Heligmosomoides bakeri HPBE_0000764601 I
HPLM_0000552201 Haemonchus placei HPLM_0000552201 I
L596_g5816 Steinernema carpocapsae L596_g5816 I
L892_g3951 Steinernema scapterisci L892_g3951 I
L893_g18096 Steinernema glaseri L893_g18096 I
L898_g620 Steinernema monticolum L898_g620 I
LOAG_02863 Loa loa LOAG_02863 I
nAv.1.0.1.g00776 Acanthocheilonema viteae nAv.1.0.1.g00776 I
NBR_0000887901 Nippostrongylus brasiliensis NBR_0000887901 I
nDi.2.2.2.g05199 Dirofilaria immitis nDi.2.2.2.g05199 I
NECAME_09605 Necator americanus NECAME_09605 I
nLs.2.1.2.g05605 Litomosoides sigmodontis nLs.2.1.2.g05605 I
nOo.2.0.1.g03339 Onchocerca ochengi nOo.2.0.1.g03339 I
OESDEN_02547 Oesophagostomum dentatum OESDEN_02547 I
OESDEN_11135 Oesophagostomum dentatum OESDEN_11135 I
PTRK_0000025200 Parastrongyloides trichosuri PTRK_0000025200 N
RSKR_0001156700 Rhabditophanes kr3021 RSKR_0001156700 N
scaffold5-EXSNAP2012.16 Pristionchus exspectatus scaffold5-EXSNAP2012.16 I
SMU15029949 Schmidtea mediterranea SMU15029949 I
SPAL_0000205900 Strongyloides papillosus SPAL_0000205900 N
SSTP_0000922000 Strongyloides stercoralis SSTP_0000922000 N
TCNE_0001890401 Toxocara canis TCNE_0001890401 I
TELCIR_00805 Teladorsagia circumcincta TELCIR_00805 I
WBGene00242147 Onchocerca volvulus WBGene00242147 I
WUBG_05875 Wuchereria bancrofti WUBG_05875 I