Bo5g098280 (Brassica oleracea)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 Bo5g098280 T179093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.911 0.911
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.911 0.911
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g098280.1 FAR1 83 187

Links

Other FAR1 family TFs
Other Brassica oleracea TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_01228 Arthroderma benhamiae ARB_01228 I
BDDG_03489 Blastomyces dermatitidis BDDG_03489 I
ACLA_037870 Aspergillus clavatus CADACLAG00003757 I
CADAFLAG00002659 Aspergillus flavus CADAFLAG00002659 I
AFUA_3G10030 Aspergillus fumigatus CADAFUAG00005370 I
CADANGAG00012848 Aspergillus niger CADANGAG00012848 I
ANIA_04985 Aspergillus nidulans CADANIAG00005410 D
CADAORAG00001156 Aspergillus oryzae CADAORAG00001156 I
ATEG_04526 Aspergillus terreus CADATEAG00005811 I
NFIA_067270 Neosartorya fischeri CADNFIAG00005884 I
CIMG_11238 Coccidioides immitis CIMG_11238 I
CPC735_003990 Coccidioides posadasii CPC735_003990 I
EURHEDRAFT_449650 Aspergillus ruber EURHEDRAFT_449650 I
e_gw1.00168.36.1 Aspergillus carbonarius e_gw1.00168.36.1 I
H101_05717 Trichophyton interdigitale H101_05717 I
H102_08324 Trichophyton rubrum H102_08324 I
H105_08351 Trichophyton soudanense H105_08351 I
HCBG_02461 Histoplasma capsulatum HCBG_02461 I
MCYG_06643 Microsporum canis MCYG_06643 I
MCYG_06643 Arthroderma otae MCYG_06643 I
MGYG_00631 Microsporum gypseum MGYG_00631 I
PAAG_07889 Paracoccidioides sp lutzii PAAG_07889 I
PABG_07472 Paracoccidioides brasiliensis PABG_07472 I
Pc13g10790 Penicillium chrysogenum Pc13g10790 I
PCH_Pc13g10790 Penicillium rubens PCH_Pc13g10790 I
PDE_04690 Penicillium oxalicum PDE_04690 I
PDIP_28630 Penicillium digitatum PDIP_28630 I
PEX1_022480 Penicillium expansum PEX1_022480 I
PITC_060220 Penicillium italicum PITC_060220 I
PITC_060230 Penicillium italicum PITC_060230 I
PMAA_025950 Penicillium marneffei PMAA_025950 I
PMAA_025950 Talaromyces marneffei PMAA_025950 I
TEQG_00974 Trichophyton equinum TEQG_00974 I
TESG_04508 Trichophyton tonsurans TESG_04508 I
TRV_01280 Trichophyton verrucosum TRV_01280 I
U727_00434350231 Penicillium solitum U727_00434350231 I
UREG_01985 Uncinocarpus reesii UREG_01985 N