CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_3g006370
(
Medicago truncatula
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
MTR_3g006370
T179767_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH32801
FAR1
64
154
IFYDEYARHVGFVMRVMSCRRSERDGRILARRFGCNKEGHCVSIQGKLGPVRKPRASTREGCKAMIHIKYDQSGKWMITKFVKDHNHPLVV
Links
Other
FAR1
family TFs
Other
Medicago truncatula
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29569.m000148
Ricinus communis
29569.m000148
N
0.889
Aquca_058_00049
Aquilegia coerulea
Aquca_058_00049
N
0.789
AT2G43280
Arabidopsis thaliana
AT2G43280
N
0.856
Bo4g194220
Brassica oleracea
Bo4g194220
N
0.774
Bo4g194230
Brassica oleracea
Bo4g194230
N
0.811
Bra037723
Brassica rapa
Bra037723
N
0.822
Bra037724
Brassica rapa
Bra037724
N
0.790
Cagra.3706s0015
Capsella grandiflora
Cagra.3706s0015
N
0.867
Carubv10024069m.g
Capsella rubella
Carubv10024069m.g
N
0.867
cassava19693.m1
Manihot esculenta
cassava19693.m1
N
0.889
cassava45111.m1
Manihot esculenta
cassava45111.m1
N
0.867
chr3.CM0047.280.nc
Lotus japonicus
chr3.CM0047.280.nc
N
0.889
Ciclev10022249m.g
Citrus clementina
Ciclev10022249m.g
N
0.889
Cla017785
Citrullus lanatus
Cla017785
N
0.856
Cucsa.242980
Cucumis sativus
Cucsa.242980
N
0.867
Eucgr.A00087
Eucalyptus grandis
Eucgr.A00087
N
0.878
Eucgr.A00281
Eucalyptus grandis
Eucgr.A00281
N
0.878
fgenesh2_kg.4__2495__AT2G43280.1
Arabidopsis lyrata
fgenesh2_kg.4__2495__AT2G43280.1
N
0.856
gene21668-v1.0-hybrid
Fragaria vesca
gene21668-v1.0-hybrid
N
0.878
GLYMA04G12273
Glycine max
GLYMA04G12273
N
0.889
GLYMA06G48170
Glycine max
GLYMA06G48170
N
0.889
Gorai.005G128700
Gossypium raimondii
Gorai.005G128700
N
0.878
orange1.1g030419m.g
Citrus sinensis
orange1.1g030419m.g
N
0.889
PK06282.1
Cannabis sativa
PK06282.1
N
0.911
POPTR_0007s01910
Populus trichocarpa
POPTR_0007s01910
N
0.733
POPTR_0017s05820
Populus trichocarpa
POPTR_0017s05820
N
0.878
PRUPE_ppa011038mg
Prunus persica
PRUPE_ppa011038mg
N
0.911
SapurV1A.1606s0030
Salix purpurea
SapurV1A.1606s0030
N
0.878
SapurV1A.3204s0030
Salix purpurea
SapurV1A.3204s0030
N
0.878
TCM_020035
Theobroma cacao
TCM_020035
N
0.900
Thhalv10001648m.g
Eutrema salsugineum
Thhalv10001648m.g
N
0.844