Gorai.005G128700 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.005G128700 T181493_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G128700.1 FAR1 45 135
Gorai.005G128700.2 FAR1 45 135

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_020035 Theobroma cacao TCM_020035 N 0.978
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.967
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.967
cassava19693.m1 Manihot esculenta cassava19693.m1 N 0.944
cassava45111.m1 Manihot esculenta cassava45111.m1 N 0.933
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N 0.933
GLYMA06G48170 Glycine max GLYMA06G48170 N 0.922
29569.m000148 Ricinus communis 29569.m000148 N 0.922
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N 0.922
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N 0.922
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N 0.911
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N 0.911
PK06282.1 Cannabis sativa PK06282.1 N 0.911
Cla017785 Citrullus lanatus Cla017785 N 0.900
GLYMA04G12273 Glycine max GLYMA04G12273 N 0.900
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N 0.900
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N 0.889
Cucsa.242980 Cucumis sativus Cucsa.242980 N 0.889
MTR_3g006370 Medicago truncatula MTR_3g006370 N 0.878
Cagra.3706s0015 Capsella grandiflora Cagra.3706s0015 N 0.867
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N 0.856
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N 0.856
AT2G43280 Arabidopsis thaliana AT2G43280 N 0.856
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N 0.844
Carubv10024069m.g Capsella rubella Carubv10024069m.g N 0.844
Bra037723 Brassica rapa Bra037723 N 0.811
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N 0.800
Bo4g194230 Brassica oleracea Bo4g194230 N 0.800
Bra037724 Brassica rapa Bra037724 N 0.790
VIT_00s0174g00130 Vitis vinifera VIT_00s0174g00130 N 0.744
evm.TU.supercontig_8.54 Carica papaya evm.TU.supercontig_8.54 N 0.711
SapurV1A.0071s0660 Salix purpurea SapurV1A.0071s0660 N 0.700