CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0071s0660
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0071s0660
T181906_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0071s0660.1.p
FAR1
28
120
NFYSEYARRLGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNIRTAAGPGPDKKPRPSAREGCKATILVKMDKSGKWVVTRFEKDHNHPLVV
SapurV1A.0071s0660.2.p
FAR1
28
120
NFYSEYARRLGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNIRTAAGPGPDKKPRPSAREGCKATILVKMDKSGKWVVTRFEKDHNHPLVV
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0002s24040
Populus trichocarpa
POPTR_0002s24040
N
0.967
evm.TU.supercontig_8.54
Carica papaya
evm.TU.supercontig_8.54
N
0.911
POPTR_0014s17510
Populus trichocarpa
POPTR_0014s17510
N
0.900
PK01836.1
Cannabis sativa
PK01836.1
N
0.889
30178.m000863
Ricinus communis
30178.m000863
N
0.867
Cucsa.388460
Cucumis sativus
Cucsa.388460
N
0.867
PRUPE_ppa019053mg
Prunus persica
PRUPE_ppa019053mg
N
0.844
TCM_002653
Theobroma cacao
TCM_002653
N
0.833
Ciclev10016721m.g
Citrus clementina
Ciclev10016721m.g
N
0.833
orange1.1g030575m.g
Citrus sinensis
orange1.1g030575m.g
N
0.833
GLYMA18G24443
Glycine max
GLYMA18G24443
N
0.822
mgf019147m
Mimulus guttatus
mgf019147m
N
0.822
Gorai.001G227800
Gossypium raimondii
Gorai.001G227800
N
0.811
Ca_17053
Cicer arietinum
Ca_17053
N
0.789
Bostr.2021s0020
Boechera stricta
Bostr.2021s0020
N
0.733
Eucgr.H00706
Eucalyptus grandis
Eucgr.H00706
N
0.733
AT4G12850
Arabidopsis thaliana
AT4G12850
N
0.722
TCM_020035
Theobroma cacao
TCM_020035
N
0.722
POPTR_0017s05820
Populus trichocarpa
POPTR_0017s05820
N
0.711
cassava19693.m1
Manihot esculenta
cassava19693.m1
N
0.711
Ciclev10022249m.g
Citrus clementina
Ciclev10022249m.g
N
0.711
orange1.1g030419m.g
Citrus sinensis
orange1.1g030419m.g
N
0.711
PRUPE_ppa011038mg
Prunus persica
PRUPE_ppa011038mg
N
0.700
Gorai.005G128700
Gossypium raimondii
Gorai.005G128700
N
0.700
SapurV1A.1606s0030
Salix purpurea
SapurV1A.1606s0030
N
0.700
SapurV1A.3204s0030
Salix purpurea
SapurV1A.3204s0030
N
0.700
PK06282.1
Cannabis sativa
PK06282.1
N
0.700