CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30178.m000863
(
Ricinus communis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
30178.m000863
T181022_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30178.m000863
FAR1
47
137
KFYVDYARRVGFVVRIMQRRRSGIDGKTLARRLGCNKQGFSPNHRNAMRPDKKPRSSAREGCKATILVKMEKSGKWVVTRFEKDHNHPLVI
Links
Other
FAR1
family TFs
Other
Ricinus communis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_8.54
Carica papaya
evm.TU.supercontig_8.54
N
0.889
POPTR_0002s24040
Populus trichocarpa
POPTR_0002s24040
N
0.867
SapurV1A.0071s0660
Salix purpurea
SapurV1A.0071s0660
N
0.867
PK01836.1
Cannabis sativa
PK01836.1
N
0.867
GLYMA18G24443
Glycine max
GLYMA18G24443
N
0.856
POPTR_0014s17510
Populus trichocarpa
POPTR_0014s17510
N
0.856
TCM_002653
Theobroma cacao
TCM_002653
N
0.856
Eucgr.H00706
Eucalyptus grandis
Eucgr.H00706
N
0.851
Cucsa.388460
Cucumis sativus
Cucsa.388460
N
0.844
orange1.1g030575m.g
Citrus sinensis
orange1.1g030575m.g
N
0.840
PRUPE_ppa019053mg
Prunus persica
PRUPE_ppa019053mg
N
0.833
mgf019147m
Mimulus guttatus
mgf019147m
N
0.833
Ciclev10016721m.g
Citrus clementina
Ciclev10016721m.g
N
0.833
Gorai.001G227800
Gossypium raimondii
Gorai.001G227800
N
0.822
Bostr.2021s0020
Boechera stricta
Bostr.2021s0020
N
0.800
Ca_17053
Cicer arietinum
Ca_17053
N
0.778
GLYMA08G45680
Glycine max
GLYMA08G45680
N
0.772
AT4G12850
Arabidopsis thaliana
AT4G12850
N
0.747
fgenesh2_kg.9__81__AT4G12850.1
Arabidopsis lyrata
fgenesh2_kg.9__81__AT4G12850.1
N
0.729