CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_002653
(
Theobroma cacao
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
TCM_002653
T180487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX93722
FAR1
112
202
KFYVEYARQVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVVTRFVKEHNHPLIA
EOX93723
FAR1
51
141
KFYVEYARQVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHKGTFGPDKKPRPSAREGCKATILVKMEKTGKWVVTRFVKEHNHPLIA
Links
Other
FAR1
family TFs
Other
Theobroma cacao
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_8.54
Carica papaya
evm.TU.supercontig_8.54
N
0.911
GLYMA18G24443
Glycine max
GLYMA18G24443
N
0.900
Gorai.001G227800
Gossypium raimondii
Gorai.001G227800
N
0.889
Cucsa.388460
Cucumis sativus
Cucsa.388460
N
0.878
PRUPE_ppa019053mg
Prunus persica
PRUPE_ppa019053mg
N
0.867
30178.m000863
Ricinus communis
30178.m000863
N
0.856
POPTR_0002s24040
Populus trichocarpa
POPTR_0002s24040
N
0.844
Ca_17053
Cicer arietinum
Ca_17053
N
0.844
Ciclev10016721m.g
Citrus clementina
Ciclev10016721m.g
N
0.844
orange1.1g030575m.g
Citrus sinensis
orange1.1g030575m.g
N
0.844
PK01836.1
Cannabis sativa
PK01836.1
N
0.844
POPTR_0014s17510
Populus trichocarpa
POPTR_0014s17510
N
0.833
mgf019147m
Mimulus guttatus
mgf019147m
N
0.833
SapurV1A.0071s0660
Salix purpurea
SapurV1A.0071s0660
N
0.833
Bostr.2021s0020
Boechera stricta
Bostr.2021s0020
N
0.776
GLYMA08G45680
Glycine max
GLYMA08G45680
N
0.733
Eucgr.H00706
Eucalyptus grandis
Eucgr.H00706
N
0.733
AT4G12850
Arabidopsis thaliana
AT4G12850
N
0.722
fgenesh2_kg.9__81__AT4G12850.1
Arabidopsis lyrata
fgenesh2_kg.9__81__AT4G12850.1
N
0.711