CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016721m.g
(
Citrus clementina
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Ciclev10016721m.g
T181297_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016721m
FAR1
43
133
KFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLVV
Links
Other
FAR1
family TFs
Other
Citrus clementina
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g030575m.g
Citrus sinensis
orange1.1g030575m.g
N
1.000
evm.TU.supercontig_8.54
Carica papaya
evm.TU.supercontig_8.54
N
0.878
GLYMA18G24443
Glycine max
GLYMA18G24443
N
0.856
PRUPE_ppa019053mg
Prunus persica
PRUPE_ppa019053mg
N
0.856
mgf019147m
Mimulus guttatus
mgf019147m
N
0.856
POPTR_0002s24040
Populus trichocarpa
POPTR_0002s24040
N
0.844
TCM_002653
Theobroma cacao
TCM_002653
N
0.844
Cucsa.388460
Cucumis sativus
Cucsa.388460
N
0.844
30178.m000863
Ricinus communis
30178.m000863
N
0.833
Gorai.001G227800
Gossypium raimondii
Gorai.001G227800
N
0.833
SapurV1A.0071s0660
Salix purpurea
SapurV1A.0071s0660
N
0.833
PK01836.1
Cannabis sativa
PK01836.1
N
0.833
POPTR_0014s17510
Populus trichocarpa
POPTR_0014s17510
N
0.811
Ca_17053
Cicer arietinum
Ca_17053
N
0.800
GLYMA08G45680
Glycine max
GLYMA08G45680
N
0.797
Bostr.2021s0020
Boechera stricta
Bostr.2021s0020
N
0.753
Eucgr.H00706
Eucalyptus grandis
Eucgr.H00706
N
0.722
AT4G12850
Arabidopsis thaliana
AT4G12850
N
0.713