CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g067290
(
Medicago truncatula
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
MTR_4g067290
T179785_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH30332
FAR1
130
218
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
KEH30333
FAR1
90
178
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
KEH30334
FAR1
90
178
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
KEH30335
FAR1
88
176
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
KEH30336
FAR1
70
158
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
KEH30337
FAR1
70
158
AFYNAYAAEVGFIIRVSKLSRSRKDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNP
Links
Other
FAR1
family TFs
Other
Medicago truncatula
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA012030
Oryza indica
BGIOSGA012030
N
BGIOSGA032058
Oryza indica
BGIOSGA032058
N
BRADI3G24210
Brachypodium distachyon
BRADI3G24210
N
F775_08653
Aegilops tauschii
F775_08653
N
F775_26780
Aegilops tauschii
F775_26780
N
GRMZM2G028039
Zea mays
GRMZM2G028039
N
GRMZM2G116638
Zea mays
GRMZM2G116638
N
GRMZM5G885274
Zea mays
GRMZM5G885274
N
LPERR03G06070
Leersia perrieri
LPERR03G06070
N
LPERR10G05390
Leersia perrieri
LPERR10G05390
N
MLOC_21553
Hordeum vulgare
MLOC_21553
N
MLOC_36533
Hordeum vulgare
MLOC_36533
N
OB03G16920
Oryza brachyantha
OB03G16920
N
OB10G15940
Oryza brachyantha
OB10G15940
N
OBART03G06740
Oryza barthii
OBART03G06740
N
OBART10G07700
Oryza barthii
OBART10G07700
N
OGLUM03G06860
Oryza glumaepatula
OGLUM03G06860
N
OGLUM10G07400
Oryza glumaepatula
OGLUM10G07400
N
OLONG_015869
Oryza longistaminata
OLONG_015869
N
OMERI03G06660
Oryza meridionalis
OMERI03G06660
N
OMERI10G05450
Oryza meridionalis
OMERI10G05450
N
ONIVA03G06470
Oryza nivara
ONIVA03G06470
N
ONIVA10G07150
Oryza nivara
ONIVA10G07150
N
OPUNC10G06730
Oryza punctata
OPUNC10G06730
N
ORGLA03G0065600
Oryza glaberrima
ORGLA03G0065600
N
ORGLA10G0063900
Oryza glaberrima
ORGLA10G0063900
N
ORUFI03G06680
Oryza rufipogon
ORUFI03G06680
N
ORUFI10G08100
Oryza rufipogon
ORUFI10G08100
N
OS03G0193000
Oryza sativa
OS03G0193000
N
Pavir.Ia02739
Panicum virgatum
Pavir.Ia02739
N
Pavir.Ia04887
Panicum virgatum
Pavir.Ia04887
N
Pavir.Ib00589
Panicum virgatum
Pavir.Ib00589
N
Pavir.Ib02999
Panicum virgatum
Pavir.Ib02999
N
Sb01g044280
Sorghum bicolor
Sb01g044280
N
Si035052m.g
Setaria italica
Si035052m.g
N
Si035089m.g
Setaria italica
Si035089m.g
N
Traes_4BL_E20E75836
Triticum aestivum
Traes_4BL_E20E75836
N
Traes_4DL_E50C77AEC
Triticum aestivum
Traes_4DL_E50C77AEC
N
Traes_5AL_4C72C5BCB
Triticum aestivum
Traes_5AL_4C72C5BCB
N
Traes_5AL_83E515188
Triticum aestivum
Traes_5AL_83E515188
N
Traes_5BL_700283665
Triticum aestivum
Traes_5BL_700283665
N
Traes_5DL_88247E2B8
Triticum aestivum
Traes_5DL_88247E2B8
N
Traes_5DL_A39210547
Triticum aestivum
Traes_5DL_A39210547
N
TRIUR3_16715
Triticum urartu
TRIUR3_16715
N
TRIUR3_25879
Triticum urartu
TRIUR3_25879
N
TRIUR3_30897
Triticum urartu
TRIUR3_30897
N