CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc06g068200.1
(
Solanum lycopersicum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Solyc06g068200.1
T180462_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g068200.1.1
FAR1
181
265
YFYNCYAKAYGFGVRVSNTWYRKSRERYRGKLSCSNAGFKKKSEANRPRPETRTGCPAMIKFRLTENKRWRIIEVELEHNHLIHP
Links
Other
FAR1
family TFs
Other
Solanum lycopersicum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29841.m002892
Ricinus communis
29841.m002892
N
0.894
cassava10866.m1
Manihot esculenta
cassava10866.m1
N
0.906
cassava11133.m1
Manihot esculenta
cassava11133.m1
N
0.729
Ciclev10025157m.g
Citrus clementina
Ciclev10025157m.g
N
0.840
Cucsa.096040
Cucumis sativus
Cucsa.096040
N
0.859
Cucsa.310210
Cucumis sativus
Cucsa.310210
N
0.721
Eucgr.J03074
Eucalyptus grandis
Eucgr.J03074
N
0.871
Eucgr.J03076
Eucalyptus grandis
Eucgr.J03076
N
0.894
evm.TU.supercontig_167.13
Carica papaya
evm.TU.supercontig_167.13
N
0.894
gene15716-v1.0-hybrid
Fragaria vesca
gene15716-v1.0-hybrid
N
0.882
GLYMA15G00440
Glycine max
GLYMA15G00440
N
0.788
Gorai.009G127000
Gossypium raimondii
Gorai.009G127000
N
0.871
mgf009738m
Mimulus guttatus
mgf009738m
N
0.847
orange1.1g043090m.g
Citrus sinensis
orange1.1g043090m.g
N
0.757
PK03582.1
Cannabis sativa
PK03582.1
N
0.894
Pm004638
Prunus mume
Pm004638
N
0.709
POPTR_0001s20880
Populus trichocarpa
POPTR_0001s20880
N
0.882
POPTR_0006s27240
Populus trichocarpa
POPTR_0006s27240
N
0.709
PRUPE_ppa002480mg
Prunus persica
PRUPE_ppa002480mg
N
0.709
PRUPE_ppa002486mg
Prunus persica
PRUPE_ppa002486mg
N
0.882
SapurV1A.0344s0260
Salix purpurea
SapurV1A.0344s0260
N
0.894
TCM_027270
Theobroma cacao
TCM_027270
N
0.906